prot_H-paniculata_contig2062.5354.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2062.5354.1
Unique Nameprot_H-paniculata_contig2062.5354.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length642
Homology
BLAST of mRNA_H-paniculata_contig2062.5354.1 vs. uniprot
Match: D7FVZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ0_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 2.800e-137
Identity = 344/689 (49.93%), Postives = 398/689 (57.76%), Query Frame = 0
Query:    1 MVETGRHQSKVQKNDQIYEEVRALRSETRTSVRSLRERFNKEGVIQNKDQFIVRLIAQERNEQEGKVAAIKSLQQWRLTDVELHNFLNRCHKKGLDGKLDLAMQWAFEQEEAGGEVNFKEGLAFYSSIGILQPRSSSYTQQQWREXXXXEDALTTAIQKRHNRGSSADPSTDATSHDSSKGKVSETSGVEVLC-NDDSTVCNSPWSSERGGGG--GSFSGAPLRSSSAHGEGDVAGGYGASRLITSGMSSTASEASGARSNRR------RRGRTPGSRDSPG--KQRGWWQWRSYSPPGPVDRHK----NELARRASVDKKGQGSTGETPKGAATPPRSASIGGRLNNGGLATITTGAVTSFISGGAFPLAQLEYPTEGAGVEARPSDAI------VRAGGGYLPPRHPLAALMLSPVS---TPGRRSGATSGSRSPRHAAAGSGXXXXXXXXXXXXXXXXXXXXXEEEDEDCAEAAVGVAARPAKGPAADDMEEGDAPTEERGTT---------------GARRRRTTAGETNGEGRGLAMATAAFVEYPNRPKSISGFMSEFADWLMPGMDRKKRQVTKDEKILVIDVYADRTHSRE-------FKSAPATPRGRMSKSAVLRGGGWFYNGDSDYSSSEE--DIYESDDDEGFWADAGTIEPVRPTPRNLGGGGGVGILERLRSLFT 641
            MVETGRHQSKVQ+  QIYEEVRALR ETR SVR LRER+  +GVIQNKDQFIV+LIAQERNEQEGKVAAIKSLQQWRLTDVELHNF+NRCHKKG+ GKLDLAMQWA EQEEAGGEVNFKEGLAFYSSIGILQPRSS++TQQQWREXXXXEDALT A+ K    G  A+ + D         K +E +G E  C N+DSTVCNSPWSSERGGGG  G FSG  LR+SS+HGEG         R   S   + A   +      R      RRGR    R   G  + R  W WRSYSPP  + RH+    N         KK        P G   P  ++ + G   +GG  T T G      S       +++ P    G   +  D++      VR+ GGYLPPRHPLAAL LSP S     G  S  T   R P      +GXXXXXXXXXXXXXXX      E      A AAV V   P   PA D   EG APTE                    GARRR   +    G       A        +  +S+SG  S  ADWLMPGM+R++  V  +   L+++VY     S E        +SAP TPRGR   ++VLR GGWFYNGDSDYS+ EE    +ES+D EGFWADA   +     P+ +GGGGG  IL RL+ LFT
Sbjct:   93 MVETGRHQSKVQRYGQIYEEVRALRKETRHSVRDLRERYKDKGVIQNKDQFIVKLIAQERNEQEGKVAAIKSLQQWRLTDVELHNFINRCHKKGIAGKLDLAMQWAVEQEEAGGEVNFKEGLAFYSSIGILQPRSSAHTQQQWREXXXXEDALTCALGKFKKAG--AEGAADV--------KGAEATGPEGSCSNEDSTVCNSPWSSERGGGGSFGGFSG-NLRASSSHGEGG--------RRHYSSSGTAADNGTAPEQTMRDAMPLHRRGRNSSHRGDLGGDEARREWSWRSYSPPSTLSRHRGRNTNGXXXXXXXAKK------NAPAGFVQP--ASGLPGA--DGG--TATNGKPPPSPS-------RVDSPDRVGGGSGKSGDSVLLGESVVRSSGGYLPPRHPLAALQLSPTSQRSAVGSDSEETGAGRDP--GRENNGXXXXXXXXXXXXXXXAARAPTEGSSAXXA-AAVAVEDTPEVRPAGDAAAEGPAPTEGXXXXXXXXXXXGKSAAPGDGARRRLRYSDAGGG-------AXXXXXXXXSDSRSVSGVFSGLADWLMPGMERRRPAVKTE---LLLEVYPSAPQSPERGQPPVVTRSAPPTPRGRRRPTSVLRDGGWFYNGDSDYSTEEEVDGSFESED-EGFWADAAESK----APQRIGGGGGDSILTRLKKLFT 725          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2062.5354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVZ0_ECTSI2.800e-13749.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2062contigH-paniculata_contig2062:2762..6609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2062.5354.1mRNA_H-paniculata_contig2062.5354.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2062 2753..8272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2062.5354.1 ID=prot_H-paniculata_contig2062.5354.1|Name=mRNA_H-paniculata_contig2062.5354.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=642bp
MVETGRHQSKVQKNDQIYEEVRALRSETRTSVRSLRERFNKEGVIQNKDQ
FIVRLIAQERNEQEGKVAAIKSLQQWRLTDVELHNFLNRCHKKGLDGKLD
LAMQWAFEQEEAGGEVNFKEGLAFYSSIGILQPRSSSYTQQQWREWREWE
DALTTAIQKRHNRGSSADPSTDATSHDSSKGKVSETSGVEVLCNDDSTVC
NSPWSSERGGGGGSFSGAPLRSSSAHGEGDVAGGYGASRLITSGMSSTAS
EASGARSNRRRRGRTPGSRDSPGKQRGWWQWRSYSPPGPVDRHKNELARR
ASVDKKGQGSTGETPKGAATPPRSASIGGRLNNGGLATITTGAVTSFISG
GAFPLAQLEYPTEGAGVEARPSDAIVRAGGGYLPPRHPLAALMLSPVSTP
GRRSGATSGSRSPRHAAAGSGGDGEGGEAAPPASPSAAVSALEEEDEDCA
EAAVGVAARPAKGPAADDMEEGDAPTEERGTTGARRRRTTAGETNGEGRG
LAMATAAFVEYPNRPKSISGFMSEFADWLMPGMDRKKRQVTKDEKILVID
VYADRTHSREFKSAPATPRGRMSKSAVLRGGGWFYNGDSDYSSSEEDIYE
SDDDEGFWADAGTIEPVRPTPRNLGGGGGVGILERLRSLFT*
back to top