prot_H-paniculata_contig20592.5340.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20592.5340.1
Unique Nameprot_H-paniculata_contig20592.5340.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig20592.5340.1 vs. uniprot
Match: D7FWK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK2_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 5.910e-40
Identity = 95/157 (60.51%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    1 MVTKQAAVFEGESRRMNIEAERIALEKTHVERDSAHLEARGQCMYIYTYREELAQTESAISLQTGGEDERMAKLSLMRMELDGEVKDLEAQLEAKKGALREVMSGLDEGEATVKAVRAKFERQLQRLRERERLVAVSRQDCQKEEEALEAERTRHRE 157
            +V+++AA+FE E+RRMN E ERI L                            +QTE AIS QTGGED RM+KL LMRMEL+GEVKDLEAQLEAK+GALREV+ GLDE E  + AVR KFERQLQRLRERERLV VSRQDCQ EE +L+ +R RHRE
Sbjct:  626 LVSERAALFEEENRRMNTEQERIVLXXXXX------------XXXXXXXXXXXSQTEKAISDQTGGEDARMSKLRLMRMELEGEVKDLEAQLEAKRGALREVLVGLDEAEGRISAVRGKFERQLQRLRERERLVEVSRQDCQTEEASLQGDRDRHRE 770          
BLAST of mRNA_H-paniculata_contig20592.5340.1 vs. uniprot
Match: A0A8J2WVN1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVN1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.660e-12
Identity = 55/144 (38.19%), Postives = 86/144 (59.72%), Query Frame = 0
Query:   12 ESRRMNIEAERIALEKTHVERDSAHLEARGQCMYIYTYREELAQTESAISLQTGGEDERMAKLSLMRMELDGEVKDLE---AQLEAKKGALREVMSGLDEGEATVKAVRAKFERQLQRLRERERLVAVSRQDCQKEEEALEAER 152
            E +R+  E ER+A+E+ HV+RD+A +             +E  + E  I  QT G+ ER   L+  R   + E++DL    A LEA++ A   V + LD+ +  +K  R+KFERQLQRL +R+++V  S +DC++E+ AL+AER
Sbjct:  426 EEKRLAAEGERLAMERAHVDRDAALV------------ADEFERMEQLIEQQTSGDLERRDALADQRALKELELEDLRRRVAVLEAERDA---VEAELDDCDGKIKLARSKFERQLQRLAQRDQMVKASAKDCEREQHALDAER 554          
BLAST of mRNA_H-paniculata_contig20592.5340.1 vs. uniprot
Match: A0A0G4FC01_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FC01_VITBC)

HSP 1 Score: 67.8 bits (164), Expect = 3.750e-10
Identity = 43/139 (30.94%), Postives = 79/139 (56.83%), Query Frame = 0
Query:   11 GESRRMNIEAERIALEKTHVERDSAHLEARGQCMYIYTYREELAQTESAISLQTGGEDERMAKLSLMRMELDGEVKDLEAQLEAKKGALREVMSGLDEGEATVKAVRAKFERQLQRLRERERLVAVSRQDCQKEEEALE 149
            GE+ R+ +E +RIA+ + H+ERD  H +            EE+AQ E+AI  QTG   +     +  +  +D E+ +LE QL  K+   +++   ++  +  + A+R+KFE+QL R+++ ER +  +++D + +E  LE
Sbjct:  522 GEAHRIQVEEQRIAMARGHIERDHTHSQ------------EEIAQVEAAIDSQTGDHRKERDDAAEQKRTVDAEIIELERQLAEKRAHQKQLGEVIEACDIRIHAIRSKFEKQLHRIQDNERRILEAKEDLKADEAQLE 648          
BLAST of mRNA_H-paniculata_contig20592.5340.1 vs. uniprot
Match: A0A7S3H7Q3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7Q3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.210e-7
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 0
Query:   12 ESRRMNIEAERIALEKTHVERDSAHLEARGQCMYIYTYREELAQTESAISLQTGGEDERMAKLSLMRMELDGEVKDLEAQLEAKKGALREVMSGLDEGEATVKAVRAKFERQLQRLRERERLVAVSRQDCQKEEEALEAE 151
            E  R+  E ERI LEK H ER+   L    +            +TE AI  QTG    R  +L     +L  E++ L+ QL  K  A +++   LD  +  +  VR K++RQLQR+ +R+  +  S+ +C +EE A+ AE
Sbjct:  536 EDSRIKAELERIGLEKGHFEREEKALSGDSE------------RTEEAIRTQTGDLSSRKQELESSMDDLSEEIRILQEQLALKLAAQQQLARDLDLVDGKIGEVRKKYDRQLQRISDRQHALQQSKAECLEEESAVLAE 663          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20592.5340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWK2_ECTSI5.910e-4060.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2WVN1_9STRA6.660e-1238.19Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0G4FC01_VITBC3.750e-1030.94Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S3H7Q3_9STRA3.210e-733.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..98
NoneNo IPR availableCOILSCoilCoilcoord: 138..164
NoneNo IPR availableCOILSCoilCoilcoord: 110..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20592contigH-paniculata_contig20592:525..1928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20592.5340.1mRNA_H-paniculata_contig20592.5340.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20592 501..1928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20592.5340.1 ID=prot_H-paniculata_contig20592.5340.1|Name=mRNA_H-paniculata_contig20592.5340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MVTKQAAVFEGESRRMNIEAERIALEKTHVERDSAHLEARGQCMYIYTYR
EELAQTESAISLQTGGEDERMAKLSLMRMELDGEVKDLEAQLEAKKGALR
EVMSGLDEGEATVKAVRAKFERQLQRLRERERLVAVSRQDCQKEEEALEA
ERTRHREAKEKVEK
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