prot_H-paniculata_contig20567.5334.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20567.5334.1
Unique Nameprot_H-paniculata_contig20567.5334.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 60.8 bits (146), Expect = 1.750e-9
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G++ K KARLVA G TQ++D+DYDE FAPT   + ++T+LA+A   DL++
Sbjct: 1007 GEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEI 1056          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A8J4AXG8_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXG8_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 1.140e-8
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            GD+++ KARLVA G TQ++ +DYDEV+AP    A ++ +LAV  + DL+L
Sbjct: 1048 GDILRYKARLVAKGYTQVEGVDYDEVYAPVSKHATLRALLAVVAERDLEL 1097          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 56.6 bits (135), Expect = 5.460e-8
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G+V K KARLVA G TQ++ ID+DE FAP     +++T+LA+A +EDL++
Sbjct:  684 GEVEKYKARLVAKGFTQVEGIDFDETFAPVVKFTSLRTLLALAAKEDLEV 733          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: UPI000901AFE6 (uncharacterized protein LOC109162248 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901AFE6)

HSP 1 Score: 52.4 bits (124), Expect = 3.050e-7
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 MGDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVA 44
            M DV + KARLVA G TQI+ IDYDE FAP     +++ +LAVA
Sbjct:   57 MNDVARNKARLVAQGHTQIEGIDYDETFAPVARLESIRILLAVA 100          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A443RUL6_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443RUL6_9ACAR)

HSP 1 Score: 53.9 bits (128), Expect = 4.600e-7
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G V + KARLVA G TQ + ID+ E FAP     +V+T+LA+A  ED++L
Sbjct:   49 GSVARFKARLVAKGFTQKKGIDFQETFAPVVKMTSVRTILAIAAHEDMEL 98          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A443RSI2_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443RSI2_9ACAR)

HSP 1 Score: 53.1 bits (126), Expect = 6.540e-7
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G V + KARLVA G TQ++ ID+ E FAP     +V+T+LA+A   D++L
Sbjct:  165 GTVARFKARLVAKGYTQMKGIDFHETFAPVVKMTSVRTILAIAAHNDMEL 214          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A4Y9ZSK6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSK6_9AGAM)

HSP 1 Score: 53.5 bits (127), Expect = 6.670e-7
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    4 VVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            V K KARLVA G TQ++ ID+DE FAP     +++T+LA+A +EDL++
Sbjct:  324 VEKYKARLVAKGFTQVEGIDFDETFAPVVKFTSLRTLLALATKEDLEV 371          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A0V1MB43_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1MB43_9BILA)

HSP 1 Score: 53.5 bits (127), Expect = 6.690e-7
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G+V K KARLVA G +Q  +IDY E FAP     +V+T+LA+A  EDL++
Sbjct:  835 GEVSKYKARLVAKGYSQRAEIDYSETFAPVVRYESVRTLLAIAADEDLEI 884          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A2S4WLZ0_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia striiformis TaxID=27350 RepID=A0A2S4WLZ0_9BASI)

HSP 1 Score: 53.5 bits (127), Expect = 6.690e-7
Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G++VK KARL A G  Q++ +DYDE +APT   AA++ ++AV + E + +
Sbjct:  923 GNLVKFKARLCAQGSAQVEGVDYDETYAPTGRPAALRAMIAVGINEGMDI 972          
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Match: A0A409WYT1_9AGAR (Uncharacterized protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409WYT1_9AGAR)

HSP 1 Score: 53.5 bits (127), Expect = 6.690e-7
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    2 GDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQL 51
            G+V++ KARLVA G +Q+  +DY + FAP    A+++TVLA+A  ED ++
Sbjct: 1121 GNVIRYKARLVAQGFSQVPGVDYFDTFAPVARLASIRTVLAIAAVEDFEI 1170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20567.5334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9XTU1_9APHY1.750e-952.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J4AXG8_9CHLO1.140e-850.00Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A4Y9ZY34_9AGAM5.460e-852.00Integrase catalytic domain-containing protein n=1 ... [more]
UPI000901AFE63.050e-756.82uncharacterized protein LOC109162248 n=1 Tax=Ipomo... [more]
A0A443RUL6_9ACAR4.600e-750.00Integrase core domain protein-like protein (Fragme... [more]
A0A443RSI2_9ACAR6.540e-748.00Integrase core domain protein-like protein (Fragme... [more]
A0A4Y9ZSK6_9AGAM6.670e-752.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A0V1MB43_9BILA6.690e-752.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A2S4WLZ0_9BASI6.690e-744.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A409WYT1_9AGAR6.690e-746.00Uncharacterized protein n=1 Tax=Gymnopilus dilepis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..50
e-value: 7.6E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20567contigH-paniculata_contig20567:4443..4598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20567.5334.1mRNA_H-paniculata_contig20567.5334.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20567 4320..4598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20567.5334.1 ID=prot_H-paniculata_contig20567.5334.1|Name=mRNA_H-paniculata_contig20567.5334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
MGDVVKLKARLVADGRTQIQDIDYDEVFAPTPSAAAVKTVLAVAVQEDLQ
LF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2