prot_H-paniculata_contig20331.5264.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20331.5264.1
Unique Nameprot_H-paniculata_contig20331.5264.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
[Close]
BLAST of mRNA_H-paniculata_contig20331.5264.1 vs. uniprot
Match: D7G4H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H8_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.080e-5
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    1 MRGQMRMTQALLEDESDEATDAVQELLFARLAPLLLLSALPPKTLTLED 49
            M GQ R+++ LL DES EA++ V+ LLF RL PLL+L+ALPP  L  ED
Sbjct: 1132 MTGQARLSEDLLGDESQEASETVRALLFCRLTPLLILNALPPAALLSED 1180
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20331.5264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4H8_ECTSI3.080e-557.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20331contigH-paniculata_contig20331:1226..3181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20331.5264.1mRNA_H-paniculata_contig20331.5264.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20331 890..3181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20331.5264.1 ID=prot_H-paniculata_contig20331.5264.1|Name=mRNA_H-paniculata_contig20331.5264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MRGQMRMTQALLEDESDEATDAVQELLFARLAPLLLLSALPPKTLTLEDT
NVLAGRGPPASTNMLGSHDSANTTAYQDHKTFASEDLVSQDPAETLAYHD
VKTRALQRGTPDIQACPDATGVGGVCQGG
back to top