prot_H-paniculata_contig20312.5259.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20312.5259.1
Unique Nameprot_H-paniculata_contig20312.5259.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 7.250e-30
Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    5 SRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLYFKTRRR 94
            SRLSL DSRRVLEETEGIGR V+GDLESQRESLLRS A+VRDTG  + +AR LL SI+R+E RHRL LY VI  LS AI+ VLY K RRR
Sbjct:  152 SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRR 241          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.160e-9
Identity = 35/82 (42.68%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    2 LHRSRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAI 83
            + RS   L ++RR + ETE +G  ++G+L SQRE+LLR+H  V++T R++ RAR +L +I R+   ++  L++VIL L  AI
Sbjct:  135 MDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFLLGAI 216          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A7S2RIE7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RIE7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 7.080e-8
Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    2 LHRSRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLYFKTRRR 94
            L RS   L +S+++L ETE IG +V+ +L+SQ ESLLR+H  V  T      AR  LR ++R+   ++L L+++I+ L    +L+LYFK  +R
Sbjct:  140 LDRSSAFLNESKQILGETEDIGNNVLTNLDSQHESLLRAHNKVDRTNVNVVEARSALRRMSRRACYNKLVLWVIIILLVVLNVLLLYFKFIKR 232          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A0G4EKS9_VITBC (V-SNARE domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EKS9_VITBC)

HSP 1 Score: 55.5 bits (132), Expect = 4.760e-7
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    9 LLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLYFK 90
            L +SRR+  ETE IG +++GDL SQRE++LR+  N+ D     D AR  + ++ R+   +++ LY +I     AII ++Y+K
Sbjct:  143 LEESRRLALETEQIGGEILGDLRSQRETILRTRHNLSDVSYNLDWARRTIANMGRRVVANKILLYSIIGVCVLAIIFIIYWK 224          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A2D4BRC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRC4_PYTIN)

HSP 1 Score: 53.1 bits (126), Expect = 2.490e-6
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 0
Query:   12 SRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLY 88
            S++++ E+E + +  + DLE QRE L+     V +T  ++  A+ LLR IA + +R +LFLYL+I+ L+   I+V Y
Sbjct:   74 SKKMVAESEQVAKHTLVDLELQREQLVGMKGMVAETSSMTSEAKELLRKIADRNYRRKLFLYLIIVVLAVTDIVVFY 150          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: UPI001CFC20E4 (vesicle transport through interaction with t-SNAREs homolog 1B n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFC20E4)

HSP 1 Score: 53.1 bits (126), Expect = 3.350e-6
Identity = 32/92 (34.78%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    2 LHRSRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRL---FLYLVILGLSTAIILVLYFK 90
            L+R+  S+  S++V  ET+ IG +++GDLE QR+ L+R+   +  TG    R+R +LRS++RK   ++L   F+ +V LG+   ++ + +F+
Sbjct:  133 LNRASQSIERSQKVAIETDHIGAEIIGDLEQQRDQLVRTKDRLVHTGEDLSRSRKILRSMSRKIVTNKLLLSFIIIVELGILGGVVYLKFFR 224          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A3M6VMN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMN6_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.850e-5
Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   11 DSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLYFK 90
            D++R L +TE I  +V  +L  QR  L  +  N+  T   ++ A+  +RS+A K    R+ L+LV+L L  AI+LV YFK
Sbjct:  132 DAQRTLAQTEAIAENVSNNLLQQRNQLEHTELNIAQTQDETEEAKGYIRSMAFKACTSRILLFLVMLALVAAIVLVSYFK 211          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: UPI000C20F4F1 (t-SNARE VTI1 n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20F4F1)

HSP 1 Score: 49.3 bits (116), Expect = 2.260e-5
Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    1 VLHRSRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLYFK 90
            +L R+  SL  + +V  ETE IG +VV +L SQRE+LLR+   +       D +R++LR ++R    ++L L L+I+     +I V Y K
Sbjct:   23 ILARTGDSLARTNQVAIETENIGTEVVSELSSQRETLLRAKNRLTHADEQLDSSRNILRKMSRNVLYNKLILVLIIIVEIGILITVCYMK 112          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: A0A5J5ETY3_9PEZI (t-SNARE n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5ETY3_9PEZI)

HSP 1 Score: 50.4 bits (119), Expect = 3.130e-5
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    2 LHRSRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRL 70
            L RS   L +S R+  ETE IG  ++GDL SQRE+++R+H  + +  R  DR+   LR +AR+   +R+
Sbjct:  129 LERSSQRLRESERIALETESIGAGILGDLASQRETIMRTHDTLNEGERYLDRSVKTLRGMARRMATNRI 197          
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Match: M4BME4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BME4_HYAAE)

HSP 1 Score: 49.3 bits (116), Expect = 3.450e-5
Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   12 SRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRVSDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLY 88
            +RR +EE+E + ++V+ DLE Q   L      V +T  ++ + RHLL+ IA +  R ++ LY+VI+ L+   ILV Y
Sbjct:   59 TRRTVEESEEVAKNVLVDLELQHSQLHEMKGVVSETSGMTSQVRHLLQMIATRSKRKKVCLYMVIVALAITDILVFY 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20312.5259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE7.250e-3073.33V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S1C7L7_9STRA7.160e-942.68Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2RIE7_9STRA7.080e-840.86Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0G4EKS9_VITBC4.760e-739.02V-SNARE domain-containing protein n=2 Tax=Vitrella... [more]
A0A2D4BRC4_PYTIN2.490e-637.66Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
UPI001CFC20E43.350e-634.78vesicle transport through interaction with t-SNARE... [more]
A0A3M6VMN6_9STRA1.850e-538.75Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
UPI000C20F4F12.260e-536.67t-SNARE VTI1 n=1 Tax=Onthophagus taurus TaxID=1663... [more]
A0A5J5ETY3_9PEZI3.130e-540.58t-SNARE n=1 Tax=Sphaerosporella brunnea TaxID=1250... [more]
M4BME4_HYAAE3.450e-537.66Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 2..64
e-value: 2.3E-13
score: 50.2
NoneNo IPR availableGENE3D1.20.5.110coord: 1..69
e-value: 3.6E-15
score: 57.9
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 4..92
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 4..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 3..61
NoneNo IPR availableTMHMMTMhelixcoord: 70..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20312contigH-paniculata_contig20312:4093..4383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20312.5259.1mRNA_H-paniculata_contig20312.5259.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20312 4093..4383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20312.5259.1 ID=prot_H-paniculata_contig20312.5259.1|Name=mRNA_H-paniculata_contig20312.5259.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
VLHRSRLSLLDSRRVLEETEGIGRDVVGDLESQRESLLRSHANVRDTGRV
SDRARHLLRSIARKEFRHRLFLYLVILGLSTAIILVLYFKTRRRLK*
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