prot_H-paniculata_contig20229.5224.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20229.5224.1
Unique Nameprot_H-paniculata_contig20229.5224.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5KKB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB7_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.660e-9
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS     ++V E+NERAI LA N  +S  +KH+DV++  + + ++ G   + +V ++E+HAD+RTK L    F  H
Sbjct:   18 LRPSAKTRKIDVVEDNERAIALAENPLSSSWSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADIRTKALPRNLFEVH 95          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 6.860e-8
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS     ++VFE+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F  H
Sbjct:  466 LRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEVH 543          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 6.950e-8
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS     ++VFE+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F  H
Sbjct: 1194 LRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEVH 1271          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 8.890e-8
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS     ++VFE+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F  H
Sbjct:  299 LRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFH 376          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5K2R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R0_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.280e-7
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 0
Query:    3 PSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            P     ++ V E+N+RAI    N H+S RTKH+DV++  +     +G   + +V T E+HADL TK L       H
Sbjct:  753 PETRGSIIQVLEDNQRAIAFVQNPHSSGRTKHIDVRFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRASLQYH 828          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.580e-7
Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS +   ++V E+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F  H
Sbjct:  243 LRPSANPRKIDVLEDNEEAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 320          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.740e-7
Identity = 28/75 (37.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHF 75
            + PS     ++VFE+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F
Sbjct:  639 LRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.360e-7
Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS+    ++V E+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F  H
Sbjct:  172 LRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 249          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.300e-7
Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQH 78
            + PS+    ++V E+NE AI LA N  +S R+KH+DV++  + + ++ G   + +V ++E+HAD+ TK L    F  H
Sbjct: 1105 LRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1182          
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Match: A0A0K8TZB9_BACLA (Copia protein n=3 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8TZB9_BACLA)

HSP 1 Score: 55.8 bits (133), Expect = 3.310e-7
Identity = 25/68 (36.76%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   10 VNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGTFRLVYVRTQEKHADLRTKPLDMGHFYQ 77
            +N++E+N+  I++ANN    +RTKH+D+KY    +  +     L Y+ T+ + AD+ TKPL    F Q
Sbjct: 1278 INIYEDNQGCISIANNPTCHKRTKHIDIKYHFTREQIECKLISLEYIPTEMQVADVLTKPLPTARFIQ 1345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20229.5224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKB7_9PHAE3.660e-937.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP36_9PHAE6.860e-837.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE6.950e-837.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE8.890e-837.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R0_9PHAE1.280e-736.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBM6_9PHAE1.580e-735.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE1.740e-737.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KCG6_9PHAE2.360e-735.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3I1_9PHAE3.300e-735.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0K8TZB9_BACLA3.310e-736.76Copia protein n=3 Tax=Bactrocera latifrons TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20229contigH-paniculata_contig20229:1943..2182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20229.5224.1mRNA_H-paniculata_contig20229.5224.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20229 1649..2182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20229.5224.1 ID=prot_H-paniculata_contig20229.5224.1|Name=mRNA_H-paniculata_contig20229.5224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MEPSMSIGVVNVFENNERAINLANNKHASRRTKHVDVKYCMVWDASDTGT
FRLVYVRTQEKHADLRTKPLDMGHFYQHA*
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