prot_H-paniculata_contig2022.5221.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2022.5221.1
Unique Nameprot_H-paniculata_contig2022.5221.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1164
Homology
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BLAST of mRNA_H-paniculata_contig2022.5221.1 vs. uniprot
Match: D7G5C7_ECTSI (Chorein N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C7_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 3.210e-84
Identity = 210/577 (36.40%), Postives = 265/577 (45.93%), Query Frame = 0 
Query:    1 MRKFLMPWQLPQEDVSKAWGLMRRHGLRWETRQTGAIRLALDEERADVRSMDPAVLQALWSIQLQMDAQLPHGLCAAARRMAVARVEWRNRTDALWQARAEKQRRLGLGLGADTAIQKLRGTAPLSTPRPLPPTAAEDG---------KDCDDGGVLNQGGDGDGADRVGTLLVRMGQLDGVRGMGFFSLAPKAVAKVMLEESSASVEDLEMETAYTKDAKYEEKSARCVWDKTFRLQVELDEFHVLELRRQRSRRRHHGLGCSPFKITSRTAGLSTSPGAATRATTSTHRTPRVAAVDRSNPTMEKETVDTPAAEGEDAKSGGRSXXXXXXXXXXXXXXXXXXXXXXXXXXGSLTRDSCTPNWSSPVRNGRTAGRDMNEAGAGAGASTSANATPMMKAVSPIRRAASLSRSRTDSIDSASSQQAIERTPRSSFLLSITCVDKGVFGDNELGTVTLPSKELTAVALKVMEHKCTLFSPNALDKDPLELTLHTVFVPPGRDVESCEQELRAVGKLRHLQNQRELADPPPSDSPALQNQSWSGMRLKPPSPLSPGVAISGTKSERPSFGEVGSREVQML 568
            + ++LMPW+LPQEDV KAWGL+ R   RWE R  G  +LA+DEERA+   +DPAVLQALWSIQLQ+DAQLPH +CA ARRMA  R  WR+R D LWQARAEKQRRLGLG+G   A  +L     +S       TA+E G          +  +  V+ + GDG  ADRVGTLLVRMGQLDGV G+G  S+APKA+A +MLEESSA++E++ +ET  T+ AKY+ K+ RC W +TFRLQ                                                                                                                                                                                           +E  PRSSFLLS+TC+DK VFG  +LGT+TLP K+LT+V LKV+EH+C LFSP A+ + P ELT+ T+FVPPG DV   EQEL A+GK R LQ + ++A   P  S           R   P+  SP    +  K +R S   VG REV++L
Sbjct:  549 LARYLMPWELPQEDVDKAWGLINRKTWRWELRGAGGFKLAIDEERAEQGQLDPAVLQALWSIQLQLDAQLPHRICAFARRMAFLRFGWRSRIDKLWQARAEKQRRLGLGVGDPPAPPRLTPNDSISF------TASEAGFMGLSEADTNEAAETTVVEEAGDG--ADRVGTLLVRMGQLDGVGGVGLLSVAPKAIATLMLEESSATLEEMNLETNSTEVAKYDHKNERCCWHETFRLQT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEAVPRSSFLLSVTCLDKSVFGVTQLGTMTLPGKQLTSVPLKVLEHRCALFSPAAVSRQPRELTIETIFVPPGEDVALAEQELSAIGKRRRLQEKLDMATSKPKSS----------FRRNKPARGSPAALDASAKPQRTSLDNVGEREVKVL 921
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2022.5221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5C7_ECTSI3.210e-8436.40Chorein N-terminal domain-containing protein n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1116..1143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2022contigH-paniculata_contig2022:9387..21845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2022.5221.1mRNA_H-paniculata_contig2022.5221.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2022 8305..22979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2022.5221.1 ID=prot_H-paniculata_contig2022.5221.1|Name=mRNA_H-paniculata_contig2022.5221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1164bp
MRKFLMPWQLPQEDVSKAWGLMRRHGLRWETRQTGAIRLALDEERADVRS
MDPAVLQALWSIQLQMDAQLPHGLCAAARRMAVARVEWRNRTDALWQARA
EKQRRLGLGLGADTAIQKLRGTAPLSTPRPLPPTAAEDGKDCDDGGVLNQ
GGDGDGADRVGTLLVRMGQLDGVRGMGFFSLAPKAVAKVMLEESSASVED
LEMETAYTKDAKYEEKSARCVWDKTFRLQVELDEFHVLELRRQRSRRRHH
GLGCSPFKITSRTAGLSTSPGAATRATTSTHRTPRVAAVDRSNPTMEKET
VDTPAAEGEDAKSGGRSGNQGNGNDRGSEGGSSGSSGSSGSSGGSLTRDS
CTPNWSSPVRNGRTAGRDMNEAGAGAGASTSANATPMMKAVSPIRRAASL
SRSRTDSIDSASSQQAIERTPRSSFLLSITCVDKGVFGDNELGTVTLPSK
ELTAVALKVMEHKCTLFSPNALDKDPLELTLHTVFVPPGRDVESCEQELR
AVGKLRHLQNQRELADPPPSDSPALQNQSWSGMRLKPPSPLSPGVAISGT
KSERPSFGEVGSREVQMLPSRSGDDSAQSSAGGSGTGSAGGTDAHRASAD
NSNDEDAPSTACAASASASASASADGAGAGAGAAPEASSNSQQQANLARR
SSTQEIPIADNFDMPGKVAFTARLAGVKGTTHLNYSAAVARAGRAGARKP
AARDLLVTFGEVETSGIETHLEFDFGRGEVGASVEAAMIQVTDNNCLLNP
DLARAPWSPGVDQVGLQQQQQQQQRSASPLPQVLRIGPLGFETRGTRSSG
KSSINSRSSNSMTATPVERAKGSEIEPCLPQTSINEKEQNVSNDDELGDS
SASASQGWIWKGRVRLGAHTAELGDWDPHEYTLLHEIWRRLRFVLPNCHP
IWPLYHTQVLRGTTAGESGTAESSFWLYRSGGMRLAVDVKIPARGACNIP
CAASPTCDVYISSEDDCMSPTNNSDANGRWQRSRPWNRRSISSRSQRPKG
TPSEYFPPAAAVATTTTKVEAPPRVETASRSRSSSAYEGGDKPTNQSAVL
ETKTATMESTVRRRVITDLLVSSDSPGNDGEDTDSADDSGVADAGSLWED
EGDIRPRLQTGGELTTAELLGRVRELEEEVSALREAAALAGGRAGCGHDG
GGRVEPVGCGRTG*
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