prot_H-paniculata_contig2006.5158.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2006.5158.1
Unique Nameprot_H-paniculata_contig2006.5158.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length376
Homology
BLAST of mRNA_H-paniculata_contig2006.5158.1 vs. uniprot
Match: D7FR52_ECTSI (Myosin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR52_ECTSI)

HSP 1 Score: 546 bits (1406), Expect = 6.250e-183
Identity = 305/375 (81.33%), Postives = 321/375 (85.60%), Query Frame = 0
Query:    1 MAFYERRCSRKIIRHWRARWLRIRKAQAEEQKRLRALAREKARLEQVLHVDVDRDVSVDDMDKDADENASSDAAPVSPVRTQPDEESEVYXXXXXXXXXXXXXXXXXXXXXGASPSDARVGANLSAPRTEPFTIATMRAFLNEPVEPHTGVIECMIRRKKGVMTTVYQAYYEPSMKLLMTAKKDKGRYIISMNPAYLKRGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPARKEIAAVSIDLTRHDDFQGPRKLEVLVADSDDEVVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDEDAGYFVLEFYKDRIKKQSVKNFMLHNNRGQFIMQFGRSKEDNVFALDFTGPFSPLAAFGVALSGCDSSV 375
            MAFYERR SRKIIRHWRAR  RIRKA+                 E  L V VD D          +++ SSDAAPVSP+R + D+     XXXXXXXXXXXXXXX       ASPSDARVGANLSAPRTEPFT ATMRAFLN+PVEP TGVIECMIRRKKGVM+T+YQAYYEPSMKLLMTAKKDKGRYII+MNP Y+K+GEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKP RKEIAAVSIDLTRHDDFQGPRKLEVLVADSDD++VDHASLLNSFGNDNTNIITPVPRMHSIKPEWDEDAGYFVLEFYKDRIKKQSVKNFMLHN+RGQFIMQFGRSKEDNVFALDFTGPFSPLAAFGVALSGCDSSV
Sbjct:  746 MAFYERRSSRKIIRHWRARRARIRKAEXXXXXXXXXXXXXXXXXESALRVTVDED----------EDDRSSDAAPVSPIRAEMDDXXXXXXXXXXXXXXXXXXXXQGGQ---ASPSDARVGANLSAPRTEPFTKATMRAFLNQPVEPQTGVIECMIRRKKGVMSTIYQAYYEPSMKLLMTAKKDKGRYIIAMNPEYMKKGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPERKEIAAVSIDLTRHDDFQGPRKLEVLVADSDDDLVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDEDAGYFVLEFYKDRIKKQSVKNFMLHNSRGQFIMQFGRSKEDNVFALDFTGPFSPLAAFGVALSGCDSSV 1107          
BLAST of mRNA_H-paniculata_contig2006.5158.1 vs. uniprot
Match: A0A7S0XDB5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDB5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.790e-22
Identity = 84/281 (29.89%), Postives = 138/281 (49.11%), Query Frame = 0
Query:  117 DARVGANLSAP-----RTEPFTIATMRAFLNEPVEPHTGVIECMIRRKKGVMTT---VYQAYYEPSMKLLMTAKK----DKGRYIISMNPAYLKRGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPARKEIAAVSIDLTRHDDFQGPRKLEVLV--ADSDDEVV------DHASLLNSFGNDNTNIITPVPRMHSIKPEWDEDAGYFVLEFYKDRIKKQSVKNFML--HNNRGQFIMQFGRSKEDNVFALDFTGPFSPLAAFGVALSGCDSSV 375
            D+ +  N+ AP     +  P  ++ M+ FL  PV    GV++C IRR KGV +    VY  Y +   + LMT+KK        Y+ISM    L R   + LGK+++     ++ VYDNG    ++     ++   RKE+A++          +GPRK++V +   D +D ++      +   +LN   + N   +     + +  P W+E  G +VL F   R+   SVKNF L   + +   ++QFG+  ++  F++D   P SPL AF + LS  DS +
Sbjct:  318 DSNITVNVPAPLDPPQQVTPLNLSNMKHFLTSPVPRTAGVVQCYIRRIKGVSSMFPPVYNLYLKDGDRFLMTSKKRPNNKTSNYLISMAENDLNRESGNYLGKLRSNFVGTEFQVYDNGVSPKESATAGDSV--IRKELASIMYAANLLGS-RGPRKMQVCIPTVDENDRIIAWRSGTERDDILNRMKDRNYRDLV---YLINKPPRWNEVVGAYVLNF-NGRVTMASVKNFQLVSPDEQNTVVLQFGKVAKEE-FSMDLQWPCSPLQAFAITLSSFDSKI 590          
BLAST of mRNA_H-paniculata_contig2006.5158.1 vs. uniprot
Match: A0A7S4S614_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S614_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.290e-21
Identity = 79/261 (30.27%), Postives = 123/261 (47.13%), Query Frame = 0
Query:  137 MRAFLNEPVEPHTGVIECMIRRKKGVMTTV---YQAYYEPSMKLLMT----AKKDKGRYIISMNPAYLKRGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLP--EKYTIKPARKEIAAVSIDLTRHDDFQGPRKLEVLVADSDDE---------VVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDEDAGYFVLEFYKDRIKKQSVKNFML----HNNRGQFIMQFGRSKEDNVFALDFTGPFSPLAAFGVALSGCDSSV 375
            MR FL +P   + G ++C I+R KG    +   Y+ Y +     +MT    AKK    Y+ISM+   + +  P  +GK+++     +Y +YD G       P  ++      R EI AV  +       +GPR+++V +   DD                +L+ F +     I  +  M +  P W+E+   +VL+F   R+   SVKNF L      N+ + I+QFGR  +D  F +DF  P SPL AF + LS CDS +
Sbjct:  253 MRKFLTKPCPKNAGTMQCYIKRNKGKKNKLFPEYRVYAKDGDVFMMTSKKRAKKKTSNYLISMHRNLIDKNSPYVIGKLRSNFFGTEYQLYDAGINPRDIDPYYDENNDTSVRSEIGAVLYE-NNVAGSRGPRRMQVCINKVDDAGDSTRQWQPAHKDEEMLSCFKHCVKPAIHHLISMENKVPSWNEELEAYVLDF-NGRVTLASVKNFQLTEMNSENQDRIILQFGRVAKDE-FTMDFQWPMSPLQAFAIVLSSCDSKI 510          
BLAST of mRNA_H-paniculata_contig2006.5158.1 vs. uniprot
Match: A0A4D9DBN3_9STRA (Tub domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBN3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 5.940e-14
Identity = 78/272 (28.68%), Postives = 122/272 (44.85%), Query Frame = 0
Query:  133 TIATMRAFLNEPVEPHTGVIECMIRRKK---GVMTTVYQAYYEPSMKLLMTAKKDKGR----YIISMNPAYLKRGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYT----IKPARKEIAAVSIDLTRHDDFQGPRKLEV------LVADS-------DDEVVDHASLLNSFGNDNTNIITPVPRMHSI---KPEWDEDAGYFVLEFYKDRIKKQSVKNFML--HNNRGQFIMQFGRSKEDNVFALDFTGPFSPLAAFGVALSGCDSSV 375
            T A + +FL  PV   TGV+EC ++R+    G +   Y  Y       LM AKK   +    Y ++M+     +  P  LGKV+A     ++ ++D G  + +   +       I  +R+E+  V +        +GPRK++V      +V D        +D  +  A L      D       V + H +    P W++    +VL F   R+   SVKNF L    +    ++QFGR  + + F +D   PF+PL AFGVALS  DS +
Sbjct:  123 TRAGLLSFLTRPVARSTGVVECYVKRRNMGAGKLFPEYYLYTRNGDHFLMAAKKQGNKRTSNYYVTMHNRDFAKDSPDYLGKVRANFVGTEFQLFDRGGSSKEKPTDGAASFRDIGASREELGVV-VYAANVLGARGPRKMQVYLPRVNMVDDKVEEWKGKEDMALPDAMLERVRRGD-------VSKFHHLINKPPRWNDQVKAYVLNF-NGRVTMASVKNFQLIAPEDHEIVLLQFGRV-DKHEFTMDVRWPFTPLQAFGVALSSFDSKI 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2006.5158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FR52_ECTSI6.250e-18381.33Myosin motor domain-containing protein n=2 Tax=Ect... [more]
A0A7S0XDB5_9STRA2.790e-2229.89Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S4S614_9STRA2.290e-2130.27Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A4D9DBN3_9STRA5.940e-1428.68Tub domain-containing protein n=1 Tax=Nannochlorop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..113
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availablePANTHERPTHR16517:SF7PROTEIN KING TUBBYcoord: 82..373
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 82..373
IPR000007Tubby, C-terminalPRINTSPR01573SUPERTUBBYcoord: 204..228
score: 25.45
coord: 316..332
score: 39.04
coord: 188..204
score: 33.42
coord: 241..268
score: 22.08
coord: 356..375
score: 31.03
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 147..372
e-value: 6.0E-38
score: 131.0
IPR025659Tubby-like, C-terminalGENE3D3.20.90.10coord: 130..375
e-value: 1.2E-44
score: 154.5
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 133..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2006contigH-paniculata_contig2006:476..3681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2006.5158.1mRNA_H-paniculata_contig2006.5158.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2006 24..5093 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2006.5158.1 ID=prot_H-paniculata_contig2006.5158.1|Name=mRNA_H-paniculata_contig2006.5158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=376bp
MAFYERRCSRKIIRHWRARWLRIRKAQAEEQKRLRALAREKARLEQVLHV
DVDRDVSVDDMDKDADENASSDAAPVSPVRTQPDEESEVYEGEEEQEEQE
EQEQQEQQEQQGASPSDARVGANLSAPRTEPFTIATMRAFLNEPVEPHTG
VIECMIRRKKGVMTTVYQAYYEPSMKLLMTAKKDKGRYIISMNPAYLKRG
EPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPARKEIAAVSIDL
TRHDDFQGPRKLEVLVADSDDEVVDHASLLNSFGNDNTNIITPVPRMHSI
KPEWDEDAGYFVLEFYKDRIKKQSVKNFMLHNNRGQFIMQFGRSKEDNVF
ALDFTGPFSPLAAFGVALSGCDSSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR025659Tubby-like_C