prot_H-paniculata_contig20044.5154.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20044.5154.1
Unique Nameprot_H-paniculata_contig20044.5154.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length269
Homology
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BLAST of mRNA_H-paniculata_contig20044.5154.1 vs. uniprot
Match: D7G753_ECTSI (Tetratricopeptide domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G753_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.020e-57
Identity = 143/250 (57.20%), Postives = 162/250 (64.80%), Query Frame = 0 
Query:   18 AESLGNLAVLLHGQTPKGAKVLDRIEDLYKRAVHADPANVNNVSNYGLFLAEIREDAVGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDYSEAKYLFERAVRASPADALTRADYGRFLALVESDMAGALENLREAMRCDPNCTTAQFNLGKLLLHQDR--PAQQGGLPKMSRVERATDVREAKGLLLRVLREKKGHPGANLCLARILVQEG 265
            AESLGNLAVLLHGQ    A +LD+IE LYKRAVHADP N NN SN+GLFLAE R D VGAE XXXXXXXXXXXXXXXXXXXX                                                EAK LFERAVR+SP+DALTRADYGRFLA+VE+++ GALENLREA+RCDP+CTTAQFNLGKLLL + R  PA +G    + R     D REAK LL +V+R+ + H GA LCLA  L +EG
Sbjct:  185 AESLGNLAVLLHGQLCTSAPLLDKIEGLYKRAVHADPVNANNFSNFGLFLAEKRGDVVGAEAXXXXXXXXXXXXXXXXXXXXVLLDSSLKQ--------------------------------------QEAKQLFERAVRSSPSDALTRADYGRFLAMVENNLEGALENLREAIRCDPDCTTAQFNLGKLLLQRRRTEPASEGS-GGIRRKAAGGDAREAKVLLRKVIRDNEEHSGAQLCLAHALAEEG 395
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BLAST of mRNA_H-paniculata_contig20044.5154.1 vs. uniprot
Match: A0A813CTF9_9DINO (TMTC1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CTF9_9DINO)

HSP 1 Score: 57.0 bits (136), Expect = 1.320e-5
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:    2 QAKRLFEAAIAANPFHAESLGNLAVLLHGQTPKG------AKVLDRIEDLYKRAVHADPANVNNVSNYGLFLAEIREDAVGA 77
            + ++L++ A+A+ P + ++LG LAVLLHG   +        K LD  E  Y+ A+ +   + NN+ NYGLFL+++R D   A
Sbjct:  252 EVRKLYDRALASAPANPDTLGALAVLLHGSASQADSDADRTKQLDEAEAAYQAALESCSWHTNNLGNYGLFLSDVRGDNAAA 333
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20044.5154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G753_ECTSI1.020e-5757.20Tetratricopeptide domain-containing protein n=1 Ta... [more]
A0A813CTF9_9DINO1.320e-536.59TMTC1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13432TPR_16coord: 2..54
e-value: 0.006
score: 17.2
NoneNo IPR availablePFAMPF13431TPR_17coord: 80..113
e-value: 6.1E-5
score: 23.1
coord: 115..150
e-value: 6.8E-6
score: 26.1
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 2..89
coord: 40..130
coord: 142..211
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..72
e-value: 1.1E-5
score: 27.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 175..266
e-value: 6.3E-7
score: 31.1
coord: 73..174
e-value: 7.2E-17
score: 63.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..215
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..198
score: 24.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20044contigH-paniculata_contig20044:225..3944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20044.5154.1mRNA_H-paniculata_contig20044.5154.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20044 225..3944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20044.5154.1 ID=prot_H-paniculata_contig20044.5154.1|Name=mRNA_H-paniculata_contig20044.5154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
MQAKRLFEAAIAANPFHAESLGNLAVLLHGQTPKGAKVLDRIEDLYKRAV
HADPANVNNVSNYGLFLAEIREDAVGAEELYKKAADIDPFHANSIYNYAV
LLESSLQQHERAESLYRRCLEVNPEHSYALYNLAVLREEHTKDGDYSEAK
YLFERAVRASPADALTRADYGRFLALVESDMAGALENLREAMRCDPNCTT
AQFNLGKLLLHQDRPAQQGGLPKMSRVERATDVREAKGLLLRVLREKKGH
PGANLCLARILVQEGGVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom