prot_H-paniculata_contig1981.5052.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1981.5052.1
Unique Nameprot_H-paniculata_contig1981.5052.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length465
Homology
BLAST of mRNA_H-paniculata_contig1981.5052.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 2.200e-50
Identity = 98/140 (70.00%), Postives = 116/140 (82.86%), Query Frame = 0
Query:    1 MTASPTVECVEVLQSRAYVCEDELIEEFQANAQWEMLFYPEFMPSQMVVAELEALMRMLFSESMCGFRDTK-RFVDLVVAPVLFTYQHLGLWCAIRHI----QAQNMPDRKRVMRTKKTIKKLLRRLKESPLGFSVCGLE 135
            MTASPT+ECVEVLQ +AYVCED+LIEEFQANA WE+L Y  F PSQ VV ELE+LMRMLFSESMCGF D+K +FV+ VV PVLF+YQHLGLWCAIRHI    +A+N+PDR R+ RTKK + +L + L ESPLG +VCG+E
Sbjct:   10 MTASPTIECVEVLQCKAYVCEDDLIEEFQANADWELLSYEVFTPSQTVVDELESLMRMLFSESMCGFGDSKEKFVEAVVGPVLFSYQHLGLWCAIRHIVMFCEAENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCGIE 149          
BLAST of mRNA_H-paniculata_contig1981.5052.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 4.670e-36
Identity = 144/469 (30.70%), Postives = 180/469 (38.38%), Query Frame = 0
Query:    1 MTASPTVECVEVLQSRAYVCEDELIEEFQANAQWEMLFYPEFMPSQMVVAELEALMRMLFSESMCGFRDTKRFVDLVVAPVLFTYQHLGLWCAIRHIQ-AQNMPDRKRVMRTKKTIKKLLRRLKESPLGFSVCGLEPPIPCKEKNQALATXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDSMNVMTQQGREXXXXXXXXXXXXXXXXXXXXXXXXGRSSGGDVDGRGH-----DDSMAVVTQEARESDSVGKGGGGGDDVGCGGRCGGGCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVNGDVSGNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLCLLPPEDXGSKDQGEAGFGRNDDSIVEAEAAGGRFGNRMEGGGGAVTAAMAAVRAAEWGVTPGRVTTLVQALLRVAEEWGDEAKDFRCMVFVERRATARVLCDYLSHFLGERLKCGY 463
            MTASPT+ECVEVLQ +AYVCED+LIEEFQANA WE+L Y                                   + VV PVLF+YQHLGLWCA+RHI+ A+N+PDR R+ RTKK + +L + L ESPLG +VCG+E       ++ + A                                                                         +DGRG      D  + V  +                    GG  GG                                   +G V+                                          R     P+D   +D  E      D   VEA+          +GGG A +     V AA WG+TPGRV TLV+ LLRV+E+WGDEAK+FRCMVFVERRATARVL  +LSH L  R  CG+
Sbjct:  170 MTASPTIECVEVLQCKAYVCEDDLIEEFQANADWELLSY-----------------------------------EAVVGPVLFSYQHLGLWCAMRHIRVAENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCGIER----APRSSSPAVPG----------------------------------------------------------------------IDGRGASKGVCDGGLPVPRR--------------------GGSAGG--------------------------------RRADGGVA-----------------------------------------LRPLAGTPDDPMEEDGEEREXXXLDG--VEAQ---------NKGGGSAASG----VGAAGWGMTPGRVITLVKTLLRVSEQWGDEAKNFRCMVFVERRATARVLSAFLSHSLSGRFCCGF 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1981.5052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQM7_9PHAE2.200e-5070.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW2_ECTSI4.670e-3630.70Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1981contigH-paniculata_contig1981:10910..23202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1981.5052.1mRNA_H-paniculata_contig1981.5052.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1981 5453..23214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1981.5052.1 ID=prot_H-paniculata_contig1981.5052.1|Name=mRNA_H-paniculata_contig1981.5052.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=465bp
MTASPTVECVEVLQSRAYVCEDELIEEFQANAQWEMLFYPEFMPSQMVVA
ELEALMRMLFSESMCGFRDTKRFVDLVVAPVLFTYQHLGLWCAIRHIQAQ
NMPDRKRVMRTKKTIKKLLRRLKESPLGFSVCGLEPPIPCKEKNQALATA
TGPPSPAGDDDDGSGGGDGAGSRGEVDVDSMNVMTQQGREGDVGEGGDGD
DDEGSGGSGSSSSSGRSSGGDVDGRGHDDSMAVVTQEARESDSVGKGGGG
GDDVGCGGRCGGGCNDDGGVDGEGHEDGMDVVVQNVCEGDSGGGNSVNGD
VSGNDGGGGGGGGGGGGGGGGGGGGGGGGGDSGDDGGGAGEDEARLCLLP
PEDGGSKDQGEAGFGRNDDSIVEAEAAGGRFGNRMEGGGGAVTAAMAAVR
AAEWGVTPGRVTTLVQALLRVAEEWGDEAKDFRCMVFVERRATARVLCDY
LSHFLGERLKCGYA*
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