prot_H-paniculata_contig1979.5039.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1979.5039.1
Unique Nameprot_H-paniculata_contig1979.5039.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length313
Homology
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 8.810e-89
Identity = 174/314 (55.41%), Postives = 205/314 (65.29%), Query Frame = 0
Query:    1 RPSFDATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIH-NLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCWAELCG 313
            RPSF    VL+MDN +L +NKPAGLLSQ DRTGD DV AL+REYVRV  NK GEAFVA+VHRLDRP         +SGVMC+ARTSKAAARLSASFR RD VEK Y+AVV G L+G G R+D LV   +S   A+  RGPR  +    V  GA   GG   A    + ++G + A LEWEAI  + +SA+   C  TG     P TLVR++LITGRKHQIR QLA MGHP+VGD RYG RSS     +SRG     D  +        +  + PL+D+SILLHASEL VPHPTR G  VR  A PP  W++LCG
Sbjct:   38 RPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRP---------VSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGA---GGRLLAAGPTSSSEG-KLAQLEWEAIDVSPSSADRLRCPRTGN----PRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYG-RSSWC---QSRGG----DATDESAVPPPRAGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCG 326          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 9.650e-53
Identity = 118/234 (50.43%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   80 MCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCWAELCG 313
            MC+ARTSKAAARLSASFR RD VEK Y+AVV G L+G G R+DLLV   +S   A+  RGPR  +       GA    G R        +   + A LEWEAI+  +S+  +L  P  G    P TLVR++LITGRKHQIR QLA MGHP+VGD RYG          SRG  +  D   V      G   + PL+D+SILLHASEL VPHPTR G  VR  A PP  W++LCG
Sbjct:    1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARGGA----GGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGN---PRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYG---------RSRGG-DATDESAVPPPRRAGR--IEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCG 215          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT)

HSP 1 Score: 161 bits (408), Expect = 9.540e-45
Identity = 116/304 (38.16%), Postives = 150/304 (49.34%), Query Frame = 0
Query:    8 QVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKD-KSILLHASELAVPHPTRPGEAVRMRAPPPDCWAE 310
            ++L +DN +L + KPAG+LSQGD TGD DV   ++ +++   NKPG  FV +V RLDRP          SGVM +ARTSKAA+RL+  FR R SVEK Y A+V G+L GSG  ED L   F + +   G R  R++                         T G+++AVLEW A+  +                R  TLVR+ L TGR HQ+R QL G+GHPIVGD+RY                                +   PL D  SI LHA+ LA+ HPT+     R  A PP  W E
Sbjct:    4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPA---------SGVMVLARTSKAASRLTEQFRKR-SVEKVYLALVEGKLEGSGRLEDWL---FKTHDTETGTRVKRVSST-----------------------TSGAKKAVLEWRALATV----------------RGRTLVRVVLETGRPHQVRVQLGGIGHPIVGDLRY--------------------------------AAPVPLGDGHSIALHAAHLALDHPTQKDRR-RFTAAPPPAWGE 222          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT)

HSP 1 Score: 151 bits (382), Expect = 6.870e-41
Identity = 107/296 (36.15%), Postives = 145/296 (48.99%), Query Frame = 0
Query:    9 VLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPP 304
            VL++DN +L + KPAG+LSQ D TGD+DV+  +++++R   +KPG  F  +VHRLDRP         + G M IARTSKAA+RL+  FR R + EK Y A+V G L GSG   D L+            RG R+  VR+                    GT G++RAV+ W +   L +                 +LV + L TGR HQIR QL+G+GHPIVGD+RYG  + +   G+ RG                            I LHA+ L + HPT+        APP
Sbjct:    5 VLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRP---------VGGAMVIARTSKAASRLAEQFRQR-TPEKRYLAMVEGRLDGSGRETDWLLKTRDPK------RGTRVKRVRQ--------------------GTDGAKRAVMTWTSRSVLGT----------------RSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYGAEAPL---GDGRG----------------------------IALHATHLTIEHPTKRDRRTFTSAPP 217          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT)

HSP 1 Score: 149 bits (376), Expect = 3.720e-40
Identity = 106/301 (35.22%), Postives = 144/301 (47.84%), Query Frame = 0
Query:    8 QVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
            +VL++DN +L + KP GLL+Q DRTGD D+L   + +++   +KPG  F+ +VHRLDRP         +SGVM +ARTSKAA RLS +FR+R  VEK Y A+V G +SG+G RED L+               R+ +V      G                    +RAVL W+A+                G +   +LV +KL+TGR HQ+R QLA +G PI+GD RYG                                    L  +++ LHA  LA  HP R  E +   APPP  W
Sbjct:    2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRP---------VSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKEDG-----------RVRIVSADHPKG--------------------KRAVLRWQAL----------------GEEGRLSLVEVKLLTGRAHQVRVQLAALGTPILGDFRYG--------------------------------ATRELDGRNLALHAYRLAFEHPVR-REPLVFTAPPPVSW 212          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A2H5XHX8_9BACT (Ribosomal large subunit pseudouridine synthase D n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5XHX8_9BACT)

HSP 1 Score: 145 bits (366), Expect = 1.860e-38
Identity = 113/304 (37.17%), Postives = 147/304 (48.36%), Query Frame = 0
Query:    5 DATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
            +A  VL+ DN +L INKPAGL SQGDR+G   VL+L++ ++++  +KPG  ++ +VHRLD P         +SGVM +ARTSKAAARL   FRDR +V+KTY A+V GEL G GT ED + P            G  M +V ES   G                    +RAVL W+A   L S N               TL+R+   TGRKHQIR QLA  G+PI+GD RY  R +                                     + LHA +L + HPT+    +   APPP  W
Sbjct:    9 EALPVLYYDNHLLVINKPAGLRSQGDRSGAPTVLSLAKAWLKMQCHKPGNVYLGLVHRLDAP---------VSGVMVLARTSKAAARLMQQFRDR-TVQKTYLALVEGELEGGGTWEDYVAPA-----------GESMRLVPESHPWG--------------------RRAVLHWQA---LLSRNGL-------------TLLRLVPETGRKHQIRVQLAFRGYPILGDRRYRSRRAFV--------------------------------PHQLALHAWQLQLTHPTQ-RIPMAWSAPPPVTW 222          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT)

HSP 1 Score: 144 bits (364), Expect = 3.590e-38
Identity = 110/300 (36.67%), Postives = 141/300 (47.00%), Query Frame = 0
Query:    9 VLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
            VL++DN +L +NKPAGL SQGDR+G   VL+L +  ++   NKPG  ++ +VHRLD P         +SGVM +ARTSKAAARL   FR+R +VEK Y A+V GEL G G  ED + P               M +V                     A     +RAVL WEA+                      TLVR+   TGRKHQIR QLA  G+P++GD RY  R                               L+P     + LHA +L+V HPTR  E ++  AP P CW
Sbjct:    9 VLYLDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAP---------VSGVMVLARTSKAAARLMQQFRER-TVEKIYLALVEGELEGEGVWEDFIAPARD-----------HMRLVS--------------------ADHPWGKRAVLRWEALMTRNGL----------------TLVRLIPETGRKHQIRVQLAFRGYPVLGDRRYRARR-----------------------------WLAP---GQMALHAWKLSVTHPTR-RERMQWTAPVPSCW 218          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT)

HSP 1 Score: 141 bits (355), Expect = 5.890e-37
Identity = 105/302 (34.77%), Postives = 145/302 (48.01%), Query Frame = 0
Query:   10 LHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCWAEL 311
            L++DN +L ++KP GLL+Q DRTGD D+++L++ Y++   +KPG  FV +VHRLDRP          SGVM +ARTSKAA+RLS  FR R   +K Y AVV G+    G   + +  +                           ++GG  S      G    QRA L +  +                  D   +LV ++L+TGRKHQIRAQLA +G PI+GD RYG ++  +   + RG                            + LHA  L V HPT+  E V + APPP+ WA L
Sbjct:    4 LYLDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPA---------SGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAI---------------------------DKGGGGSVDVVPVGE--GQRAALRYRTL----------------ARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRYGNQTPFA---DGRG----------------------------VALHAYRLVVEHPTK-REPVTVVAPPPEAWAGL 218          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A7Y2GAW4_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2GAW4_9BACT)

HSP 1 Score: 140 bits (354), Expect = 1.080e-36
Identity = 109/307 (35.50%), Postives = 141/307 (45.93%), Query Frame = 0
Query:    2 PSFDATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
            P+  +  VL+ DN +L + KPAG+ SQ DRTGD D+L   + Y++   +KPG  F+ + HRLDRP          SGVM +ARTSKAA+RL   F DRD VEK Y A+V G + G GT E                 G      R  VAA   EEG              +Q A L+WE +                      T+V ++L TGRKHQIR QLA +GHPIVGD+RYG                         EF+           +++ LH   L + HPT  G A+  +A PP  W
Sbjct:    2 PTPFSEYVLYCDNHLLVVCKPAGMPSQRDRTGDPDLLTAGKGYLKEKFDKPGRVFLGLAHRLDRPA---------SGVMVLARTSKAASRLGRQFLDRD-VEKQYVALVEGSVVGQGTTE----------------AGYLKKSERGVVAASRGEEG--------------AQYAELDWEKVKETARG----------------TIVNVRLKTGRKHQIRHQLARIGHPIVGDMRYG----------------------ATREFD----------GRNLALHCYLLTIDHPTL-GHAMSWQALPPLSW 219          
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A3N1UFZ4_9DELT (23S rRNA pseudouridine1911/1915/1917 synthase n=1 Tax=Desulfosoma caldarium TaxID=610254 RepID=A0A3N1UFZ4_9DELT)

HSP 1 Score: 139 bits (351), Expect = 6.680e-36
Identity = 109/300 (36.33%), Postives = 147/300 (49.00%), Query Frame = 0
Query:    9 VLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
            VLH+DN +L + KPAGLL QGD +GD+ +L L+R++++    KPG  FV +VHRLDRP         +SG++ +ARTSKAA+RLSA FR+ +  +K Y AVV G  S +           + V+G          ++R+           S+S       T G+QRA L +  +                      TL+ + L TGRKHQIRAQLA  G PIVGDVRYG  + + YR                                SI LHA +L +PHPT+ GEAV +  P P  W
Sbjct:   32 VLHVDNHLLAVYKPAGLLVQGDPSGDLSLLDLARKWIKERYKKPGNVFVGLVHRLDRP---------VSGLVLLARTSKAASRLSAVFRE-NRAQKIYLAVVEGRPSRA---------CATLVHG----------LIRQE----------SKSVAVLPVKTPGTQRAELHYRTV----------------AFSDQRTLLAVHLKTGRKHQIRAQLAHEGCPIVGDVRYGAPTPLPYR--------------------------------SIALHAWKLTLPHPTK-GEAVEISCPLPLNW 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLH5_9PHAE8.810e-8955.41PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D8LGZ5_ECTSI9.650e-5350.4323S RNA-specific pseudouridylate synthase n=1 Tax=... [more]
A0A259TYX9_9BACT9.540e-4538.16PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A800M4B4_9BACT6.870e-4136.15RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A848XZP8_9BACT3.720e-4035.22RNA pseudouridine synthase n=1 Tax=Rhodothermaceae... [more]
A0A2H5XHX8_9BACT1.860e-3837.17Ribosomal large subunit pseudouridine synthase D n... [more]
A0A1M6P7L7_9BACT3.590e-3836.67Ribosomal large subunit pseudouridine synthase D n... [more]
A0A271J2Z8_9BACT5.890e-3734.77PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A7Y2GAW4_9BACT1.080e-3635.50RNA pseudouridine synthase n=1 Tax=Rhodothermales ... [more]
A0A3N1UFZ4_9DELT6.680e-3636.3323S rRNA pseudouridine1911/1915/1917 synthase n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 2..304
e-value: 2.5E-42
score: 146.8
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 8..309
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 17..224
e-value: 6.7E-21
score: 75.0
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 5..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1979contigH-paniculata_contig1979:986..2731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1979.5039.1mRNA_H-paniculata_contig1979.5039.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1979 986..2731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1979.5039.1 ID=prot_H-paniculata_contig1979.5039.1|Name=mRNA_H-paniculata_contig1979.5039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp
RPSFDATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTN
KPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRD
SVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVA
AGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGA
DRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRG
SRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRM
RAPPPDCWAELCG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf