prot_H-paniculata_contig1977.5032.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1977.5032.1
Unique Nameprot_H-paniculata_contig1977.5032.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
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BLAST of mRNA_H-paniculata_contig1977.5032.1 vs. uniprot
Match: D7FLT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT7_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.870e-51
Identity = 98/170 (57.65%), Postives = 123/170 (72.35%), Query Frame = 0 
Query:   17 PCLTESFSVHFR---STATHRSTSLGRCDLAPSMTLRGERSAVDRFVGAALLGGSLLVAGVGIVSGVDVARADVSISPRCISGEGPQCDDLTEGSELIKTLQAKSAQNKEKYIRQTLDTYNDHNFKADYFRAENKHMVRHKDGKYEILTNADYVEAERAGKVKNDVFLNE 183
            P   ESF+V      S+ +  STSL RC    +M        ++R +GA L+GG+L      I   +DVARADVSISPRCI+GEG QC+DL EG+ELIK+LQAKSA +K++Y ++TLDTYN HNFK DYF+AE+KHMV+H  GKYEILTNA+Y  AE+AGKV+NDVFL E
Sbjct:   13 PSCVESFAVLCTAPSSSTSPVSTSL-RCRSTRTMMTLPTAGDLNRALGAVLVGGAL------ITGAMDVARADVSISPRCITGEGAQCEDLAEGNELIKSLQAKSAISKDRYFQETLDTYNVHNFK-DYFKAESKHMVKHNTGKYEILTNAEYAAAEKAGKVRNDVFLGE 174
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BLAST of mRNA_H-paniculata_contig1977.5032.1 vs. uniprot
Match: A0A7S2UQ54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ54_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.200e-14
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 0 
Query:   67 GSLLVAGVGIVSGVDVARADVSI---SPRCISGEGPQCDDLTEGSELIKTLQAKSAQNKEKYIRQTLDTYNDHNFKADYFRAEN--KHMVRHKDGKYEILTNADYVEAERAGKVKNDV 179
            G L  A +G+ SG+ ++    +    S RC SGEG  C DL EG++ IK+LQ KSA NKE Y ++ L+ YN  N+  D+F +    K++V+  DGK+ + T+A+    + AGK+K ++
Sbjct:   56 GLLQTAMMGVASGLFLSSTPANAVLSSGRCASGEGEGCTDLAEGNDYIKSLQIKSAANKEMYAQEALNAYNMKNY-PDFFASLTPPKYLVKGLDGKFLVYTDAELSVLKGAGKIKLEI 172
[Close]
BLAST of mRNA_H-paniculata_contig1977.5032.1 vs. uniprot
Match: A0A1Z5KK89_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK89_FISSO)

HSP 1 Score: 66.2 bits (160), Expect = 1.840e-10
Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = 0 
Query:   83 ARADVSISPRCISGEGPQCDDLTEGSELIKTLQAKSAQNKEKYIRQTLDTYNDHNFKADYFRAENKHMVRHKDGKYEILTNADYVEAERAGKVKNDVFLNEG 184
            A A +S S  C +G G  C DL+EG+ELI++LQ KSA N+E+Y ++ LD Y   N+  D+F    K +V+  DG +  L +++  + ++ GKV  ++   +G
Sbjct:   42 AEAVIS-SKYCSAGVGEGCGDLSEGNELIRSLQEKSAINRERYQQEALDAYYMKNY-PDFFGVVGKTLVKKPDGTFVALADSEVEKLKQEGKVTFEIPRTKG 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1977.5032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLT7_ECTSI1.870e-5157.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UQ54_9STRA6.200e-1438.98Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A1Z5KK89_FISSO1.840e-1037.25Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.785

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1977contigH-paniculata_contig1977:11449..13593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1977.5032.1mRNA_H-paniculata_contig1977.5032.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1977 10409..13684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1977.5032.1 ID=prot_H-paniculata_contig1977.5032.1|Name=mRNA_H-paniculata_contig1977.5032.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MHFFYISFAALLISWTPCLTESFSVHFRSTATHRSTSLGRCDLAPSMTLR
GERSAVDRFVGAALLGGSLLVAGVGIVSGVDVARADVSISPRCISGEGPQ
CDDLTEGSELIKTLQAKSAQNKEKYIRQTLDTYNDHNFKADYFRAENKHM
VRHKDGKYEILTNADYVEAERAGKVKNDVFLNEG*
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