prot_H-paniculata_contig1970.5016.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1970.5016.1
Unique Nameprot_H-paniculata_contig1970.5016.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length243
Homology
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BLAST of mRNA_H-paniculata_contig1970.5016.1 vs. uniprot
Match: D7FVX9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX9_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.470e-31
Identity = 72/166 (43.37%), Postives = 98/166 (59.04%), Query Frame = 0 
Query:    1 MVKFMRTVGFAAVFAGWCGCVASAWGKEKNEDDKLPDMPKGKDAVDLARAGFRQAAGDVGLLQDLMKDMKDPETMKEVEXXXXXXXXXXXXXXXVNSPEWKDAYGETMDFLSDPKAMESMKKQAEEYANFLAAGPGKDGRRDVEMGLGAAANAANNPKFMQEAMEM 166
            MV+ M  +G  A   G+  C A AWG  K +D++ P+MP GKDAVDL RAGFRQ       ++    ++ D    KE+                + S EWK+   +  DFL DPKAME+M K+ +EY +F+AAGPGKDG+RD  MGL AA+ +  +P FM++AMEM
Sbjct:    1 MVRLMF-IGVVATLLGF-SCRADAWGGGKKKDEE-PEMPTGKDAVDLGRAGFRQ-------VESARDNLWDKNFKKEMNKL-------------MESDEWKNGATDATDFLQDPKAMEAMAKKTKEYTDFIAAGPGKDGKRDAAMGLNAASASMMDPNFMKDAMEM 143
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1970.5016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVX9_ECTSI2.470e-3143.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1970contigH-paniculata_contig1970:13551..21250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1970.5016.1mRNA_H-paniculata_contig1970.5016.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1970 13377..21386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1970.5016.1 ID=prot_H-paniculata_contig1970.5016.1|Name=mRNA_H-paniculata_contig1970.5016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
MVKFMRTVGFAAVFAGWCGCVASAWGKEKNEDDKLPDMPKGKDAVDLARA
GFRQAAGDVGLLQDLMKDMKDPETMKEVEKLMKDKDFMKGVDQLVNSPEW
KDAYGETMDFLSDPKAMESMKKQAEEYANFLAAGPGKDGRRDVEMGLGAA
ANAANNPKFMQEAMEMMKDPAAMKKVEETMKNPEFQKTMKEMMDSPVMKA
QLEEVSRHGASKERKRHSVIFFRMHCRRGSSNPVFSWSKVGI*
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