prot_H-paniculata_contig19637.4989.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19637.4989.1
Unique Nameprot_H-paniculata_contig19637.4989.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length293
Homology
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.760e-38
Identity = 101/292 (34.59%), Postives = 148/292 (50.68%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIA---------GRREKVDDFKHNINLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFGADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V +L+++LYGLKQS R WN T+D+F+  IG  +  TD C+Y  RDD   I   VV+YVDDL++A          +R   + F+ + +L   + C G+EV R   +G + + Q  ++  VL  +G ++C+ V TP +  +K +              G    D   GV             YR  V ++MY   GTR D+A AV   ++   DPC   +   K + R L      GI   G  +G  +G   ADW  ++E R+ST+GYVF LN G I+  S KQ+ V+ SSTE
Sbjct:  136 VCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMI--FVVLYVDDLILACNDTDLLAATKRALSERFEMS-DLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEG--------GCKHDDTMQGVP------------YRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGELIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTE 404          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: W4VRP9_9DIPT (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=2 Tax=Corethrella appendiculata TaxID=1370023 RepID=W4VRP9_9DIPT)

HSP 1 Score: 149 bits (376), Expect = 9.710e-37
Identity = 99/297 (33.33%), Postives = 161/297 (54.21%), Query Frame = 0
Query:    4 FSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVI-AGRREKVDDFKHNINL-----ALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGF-GADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            +S+D     RL+K+LYGLKQ+ R WN  L++ L  +G  +S  D+C+YF + DG  I ++V +YVDDL+I +  +  + D K  +N       L  A + + ++  +   +I + Q  Y++E+L  +G  +C+ V TP+    K S    AD P+ P+ +                 R   +  YR ++  LMY S  TR DI++AV++ ++   +P ++ +   K + R L     + +T   +SN  G+ G+  ADW  +++DR+ST+G+VF    GAIS CS KQQ VS SS E
Sbjct:  997 YSKDSSKCCRLKKALYGLKQASRVWNQKLEETLKRLGFQQSDYDTCVYF-KSDGNRI-LIVAIYVDDLLIFSSCKNWIMDVKRQLNTHFKMKELGEASYCLGMKIIKTGDSITLDQEHYVKEILTKFGMADCKPVTTPLNVSEKLS---KADCPNTPEEI-----------------REMQNVPYREVIGCLMYLSQCTRPDISFAVNKLSQFNSNPGMKHWLAAKHLLRYLQGTSSYKLTYHRESNMDGIVGYCDADWAADIDDRRSTSGFVFMSQGGAISWCSRKQQTVSLSSCE 1271          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 142 bits (359), Expect = 4.830e-36
Identity = 99/292 (33.90%), Postives = 146/292 (50.00%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIAGR--------REKVDDFKHNINLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGF-GADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V RL+KS+YGL QSGR+WN   D  +  +GL ++  D+C+Y+   DG ++   V V+VDDL+I           R+++       ++   R   GIEV R R  GT+ +SQ  YI  +L  YGF     V TP+     T   +       PK        + A              EY+ M+  LMYA+  TR DIAYAV + ++   +P  E    CK +FR LS   ++G+  G + +G    G+  AD+  N++DRKS +GY + L   A +  S KQ  V+ S+TE
Sbjct:   31 VWRLKKSIYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYYRERDGEQV--WVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQL------PKDAPPAAPSVRA--------------EYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYAYMLAGAAFAWSSKKQTTVATSTTE 300          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A1Y1NIJ3_PHOPY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NIJ3_PHOPY)

HSP 1 Score: 140 bits (353), Expect = 2.300e-35
Identity = 105/292 (35.96%), Postives = 144/292 (49.32%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIAGRREKVDDFKHNI--------NLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFG-ADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V RL++SLYGLKQS R+WNN L   LVG G  RS  D CLY  + +G    ILV  YVDDL+IA   EK+      I        +L   R   GIEV R    G   ISQ  YI +++K  G E+ +  P P++  V    P + DKP         L D               +TEY+ +V  L++ +  +R DIA  V   +R++ +P   D+N  + I R L   ++  +    + +  GL G+  ADW E   DRKS +G++FK   G IS    KQ  VS S+ E
Sbjct:   16 VCRLKRSLYGLKQSARSWNNKLHQVLVGDGFKRSEADPCLYSKQVNGKRCYILV--YVDDLIIASEEEKLITLAGRILERNFEIVSLGEVRNYVGIEVERDNA-GDFHISQRKYITDIVKSAGLEDAKSSPIPID--VGYFKPNTEDKP---------LPD---------------NTEYQKLVGKLLFVAVNSRPDIAAPVSILSRKLSNPTQRDWNELRRIVRYLKGSINLKLRLSNRGDDSGLVGYADADWAECRNDRKSNSGFLFKFCGGTISWACRKQTCVSLSTAE 278          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 145 bits (365), Expect = 2.830e-35
Identity = 98/292 (33.56%), Postives = 150/292 (51.37%), Query Frame = 0
Query:   13 RLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIA---------GRREKVDDFKHNINLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEG--KVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFGADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            +L+++LYGLKQS R WN T+D+F+  IG  +   D C+Y  R+D   +   VV+YVDDL++A          +R   + F+ + +L   + C G+EV+R   +G + + Q  +++ VL  +G ++C+ V TP +   K+  S  +   K  E       + D+                 YR  V +LMY   GTR D+A +V   ++   DPC   +   K + R L      GI   G S+G  +G   ADW  ++E R+ST+GYV  LN G IS  S KQ+ V+ SSTE
Sbjct: 1008 KLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSATM--FVVIYVDDLILACNNKDLLAATKRALSERFEMS-DLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDE------TMKDV----------------PYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGELIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTE 1274          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 144 bits (362), Expect = 7.010e-35
Identity = 104/293 (35.49%), Postives = 150/293 (51.19%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVI---------AGRREKVDDFKHNINLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFG-ADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V +L+K++YGLKQSGR WNNTLD+ L  +G  RS  ++CLY  +   G     + VYVDDL+I         A +R+    F+ + + +LS    G+E++R    G + + Q +YIR +LK YG + CR V TP++                P  L     D    V         N T+Y+ ++ SLMY +  +R DI +AV + ++R  +P  E  N  K I R LS  ++  I    +  G  + GF  ADW  +  DRKS +GY F L   A S  S KQ +V+ SSTE
Sbjct:  960 VLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFL-GLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLD----------------PGFLVCCKDDSCVKV---------NVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTE 1222          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A8H6XNZ2_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XNZ2_9AGAR)

HSP 1 Score: 143 bits (360), Expect = 1.310e-34
Identity = 104/294 (35.37%), Postives = 146/294 (49.66%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIAGR-REKVDDFKHNI-------NLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFG---ADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V RL K++YGLKQSGR WN   D  L  I L ++  D C+Y+   DG      V V+VDDL+I    R + +  K  I       +L   R   GIE+RR R +GTI +SQ  Y+  +L  YG  + + + TP++  V T     AD P  P  L                       +Y+ ++  LMYA+  TR DIAYAV   ++   +P  E ++ CK + R LS   ++G+  G  S+   +   G   AD+  NV+DRKS +GY F L   A +  S KQ  V+ SSTE
Sbjct: 1036 VWRLLKTIYGLKQSGREWNREFDRKLTSIQLVKTAVDHCVYYREHDGERT--WVTVWVDDLLILSTSRHEAERTKAEIEGLFDTKDLGEPRKIIGIEIRRDRGSGTITLSQLHYVETLLAKYGLTDAKPLATPMDPNV-TLRKVPADAPEAPAELRG---------------------QYQSIIGGLMYAAICTRPDIAYAVTTLSQYCSNPGPEHWSACKRVLRYLSGTRNYGLVYGNTSDSDEIVSTGYSDADYAANVDDRKSISGYAFMLGGAAYAWSSKKQSTVATSSTE 1305          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A6G0X2D0_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2D0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.640e-34
Identity = 104/292 (35.62%), Postives = 143/292 (48.97%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIAGRREKVDD---------FKHNINLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFGADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V +L+KSL GLKQ+ R WN T+D F++ I + +S  D C+Y  R   G   +LV +YVDDL++A    K+           FK     ALS  C GIEV R  P+G++ I Q  +++ VL  +  + C+ V TP E   + S         E   +G +                    +YR  V  LMY    TR DIA AV  A++ +E+P    ++  K IFR L    DFGI   G  +  G     ADW  +   R ST+GY F LN G +S  S KQ+ V+ SSTE
Sbjct:   77 VLKLKKSLCGLKQAPRLWNETIDGFMLSIRIAKSNADHCIYVMRT--GSRVVLVSLYVDDLILASNCNKMMQATKEALSKRFKMTDLGALSY-CLGIEVMR-SPSGSVFIHQSKFLKSVLVKFNMQGCKPVKTPQESGQRLSKYMCPTTDEEKTDMGRI--------------------QYRSAVGCLMYLMVTTRPDIAVAVGVASQFLENPGQRHWSAVKRIFRYLKGTEDFGIKYSGSQDVCGY--TDADWVGDANTRHSTSGYCFMLNNGLVSWKSRKQRTVALSSTE 342          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A0V1GS48_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V1GS48_9BILA)

HSP 1 Score: 142 bits (359), Expect = 1.770e-34
Identity = 105/295 (35.59%), Postives = 154/295 (52.20%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDDGGEIDILVVVYVDDLVIAGRRE-KVDDFKHNINLALSRA-------CWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSA---PKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFG-ADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V R+RK+LYGLKQSGR W   LD+ L+  GL  ++ D C+YF R  G E+ I   +YVDD++IA     ++++ K  ++ +           C GIE+++   NG I +SQ  YI ++L+ +G    + V TP++   K SA   PK+  + +E +++                        YR +V SLMY S  TR DIA+AV   ++  E+   E +   K + R L     +G+    + N   L GF  ADW  N +DR+S TGYVFK    AIS  S KQ+ V+ SSTE
Sbjct: 1018 VCRIRKALYGLKQSGRQWYKKLDEKLLQYGLKATSGDPCVYFERR-GRELTI-AAIYVDDVIIASNNTARMNELKKTLSKSFEMKDMGPIHYCLGIEIKQ-SANGDIEMSQQKYIMDILERFGMRNSKPVGTPIDASNKLSAETCPKTEAEKAEMQNM-----------------------PYRSLVGSLMYLSVSTRPDIAFAVSLLSQFNENYGKEHWTAAKRVLRYLKKTASYGLRF--RRNSGTLMGFSDADWGGNSDDRRSYTGYVFKFGSAAISWESRKQRTVALSSTE 1284          
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 142 bits (357), Expect = 3.250e-34
Identity = 106/301 (35.22%), Postives = 150/301 (49.83%), Query Frame = 0
Query:   11 VRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFS--RDDGGEIDILVV-VYVDDL--------------VIAGRREKVDDFKHNINLALSRACWGIEVRRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADKPSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDIAYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGGFG-ADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE 293
            V +L+KSLYGLKQS R WN+TLD FL   G  +   DSCLY    +   G+I+ +++ ++VDD+              V  G + KV+D     ++       G+ ++R R + T+ ISQ  Y+  VLK +  EEC+ V TP+E                P      LSD           R  N  EY+ ++  L Y +T TR D+A AV   ++ M  P  E +   K I R +   L+FGIT   K     L G+  ADW  + E R+ST+GY+F+++   IS CS KQ  VS SSTE
Sbjct:  975 VCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHIL------GMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLE----------------PGKQFHELSD---------DERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTE 1244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19637.4989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D6YB57_9STRA2.760e-3834.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
W4VRP9_9DIPT9.710e-3733.33Putative retrovirus-related pol polyprotein from t... [more]
A0A146H7K8_MYCCL4.830e-3633.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Y1NIJ3_PHOPY2.300e-3535.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8K1FHK1_PYTOL2.830e-3533.56Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
W8BWJ0_CERCA7.010e-3535.49Retrovirus-related Pol polyprotein from transposon... [more]
A0A8H6XNZ2_9AGAR1.310e-3435.37Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
A0A6G0X2D0_9STRA1.640e-3435.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0V1GS48_9BILA1.770e-3435.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9IUY0_PARCT3.250e-3435.22Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 11..136
e-value: 7.7E-20
score: 71.6
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 13..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19637contigH-paniculata_contig19637:510..1409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19637.4989.1mRNA_H-paniculata_contig19637.4989.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19637 510..1409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19637.4989.1 ID=prot_H-paniculata_contig19637.4989.1|Name=mRNA_H-paniculata_contig19637.4989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=293bp
FSPFSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCL
YFSRDDGGEIDILVVVYVDDLVIAGRREKVDDFKHNINLALSRACWGIEV
RRYRPNGTIIISQGSYIREVLKIYGFEECRGVPTPVEGKVKTSAPKSADK
PSEPKSLGAVLSDIGAGVQESSSRRSGNSTEYRGMVRSLMYASTGTRTDI
AYAVHQAARRMEDPCLEDFNTCKLIFRCLSTVLDFGITSGGKSNGHGLGG
FGADWTENVEDRKSTTGYVFKLNVGAISGCSTKQQLVSWSSTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2