prot_H-paniculata_contig1943.4912.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1943.4912.1
Unique Nameprot_H-paniculata_contig1943.4912.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5L217_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L217_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 3.120e-22
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            ++ YFRHLL T N  QE +T + EDN G  KL+RS  +  RTKHID+KFH VRSLV D VV+V+ +ST LQ AD+ T+  +  + LR+R ML+G
Sbjct:  737 IIKYFRHLLDTINQTQEEATVVWEDNSGALKLTRSFRITPRTKHIDVKFHHVRSLVTDGVVDVKQISTSLQKADIFTKWLNPSEFLRARGMLLG 830          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5JUI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI6_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 7.550e-22
Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            ++ YFRHLL T N   E +T + EDN G  KL+RS  +  RTKHID+KFH VRSLV D VV+V+ +ST LQ AD+ T+  +  + LR+  ML+G
Sbjct:  185 IIKYFRHLLDTINQTHEEATVVWEDNSGALKLTRSFRITPRTKHIDVKFHHVRSLVTDGVVDVKQISTSLQKADIFTKGLNPSEFLRASGMLLG 278          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5JHU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.210e-20
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIV-EDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            ++ YFRHLL T N  QE +T +V E N G  KL+RS ++  RTKHID KFH VRSLV D VV+V+ +ST LQ AD+ T+  +  + LR+R ML+G
Sbjct:  301 IIKYFRHLLDTINQTQEEATTVVWEGNSGALKLTRSFHMIPRTKHIDAKFHHVRSLVADGVVDVKQISTSLQQADIFTKGLNPSEFLRARGMLLG 395          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5JDM0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.340e-18
Identity = 41/94 (43.62%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            +V++FR+LL + N+KQE  T + EDN GT   ++   +  R+KHID+K+H VR L +  +V+V+ + T LQ AD+LT+   AVK L++R++L+G
Sbjct:  495 IVIHFRNLLKSLNMKQEQPTVVFEDNTGTVAFAKGAKLTPRSKHIDVKYHHVRYLEEKKIVDVKYIETNLQKADILTKSQGAVKFLQNRLLLLG 588          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5KBN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBN9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.430e-18
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLM 93
            M+L++RHLL T N +Q  +T + ED+      S S  V  +TKHID+K+H VRSL+ + VV V+ + T LQ AD+LT+    VK L +R  L+
Sbjct:    7 MILHWRHLLKTINREQTEATVLFEDSTAAISTSESNKVTQKTKHIDVKYHHVRSLIVNKVVEVKKIDTNLQKADMLTKNLGTVKFLNNRRQLL 99          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5KMI7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.570e-18
Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            +V++FR+LL + N+KQE  T + EDN G   L+    +  RTKHID+K+H VR L +  +V+V  + T LQ AD+LT+   AVK L++R++L+G
Sbjct:  660 IVIHFRNLLKSLNMKQEQPTVVFEDNTGAIALAMGAKLTPRTKHIDVKYHHVRYLEEKKIVDVNYIETNLQKADILTKSQGAVKFLQNRLLLLG 753          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5KM24_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM24_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.600e-18
Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            +V++FR+LL + N+KQE  T + EDN G    ++   +  RTKHID+K+H VR L +  +++V+ + T LQ AD+LT+   AVK L++R++L+G
Sbjct: 1306 IVIHFRNLLKSLNMKQEQPTVVFEDNTGAIAFAKGAKLTPRTKHIDVKYHHVRYLEEKKIIDVKYIETNLQKADILTKSQGAVKFLQNRLLLLG 1399          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.070e-18
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            MV++FR+LL +  +KQ+ +T + EDN G    ++   +  RTKHID+KFH VR L   NVV+V  + T  Q AD+LT+   AVK L++R++L+G
Sbjct:   46 MVIHFRNLLESLKMKQKQATVLYEDNAGAVAFAKGSKITPRTKHIDVKFHHVRHLEDQNVVDVTYIDTNRQRADILTKSSGAVKFLQNRLILLG 139          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.210e-18
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            MV++FR+LL +  +KQ+ +T + EDN G    ++   +  RTKHID+KFH VR L   NVV+V  + T  Q AD+LT+   AVK L++R++L+G
Sbjct: 1626 MVIHFRNLLESLKMKQKQATVLYEDNAGAVAFAKGSKITPRTKHIDVKFHHVRHLEDQNVVDVTYIDTNRQRADILTKSSGAVKFLQNRLILLG 1719          
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Match: A0A6H5KBY7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.210e-18
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFHDVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMG 94
            MV++FR+LL +  +KQ+ +T + EDN G    ++   +  RTKHID+KFH VR L   NVV+V  + T  Q AD+LT+   AVK L++R++L+G
Sbjct: 1697 MVIHFRNLLESLKMKQKQATVLYEDNAGAVAFAKGSKITPRTKHIDVKFHHVRHLEDQNVVDVTYIDTNRQRADILTKSSGAVKFLQNRLILLG 1790          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1943.4912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L217_9PHAE3.120e-2253.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JUI6_9PHAE7.550e-2251.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHU1_9PHAE3.210e-2052.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDM0_9PHAE1.340e-1843.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KBN9_9PHAE2.430e-1844.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMI7_9PHAE2.570e-1844.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KM24_9PHAE3.600e-1842.55Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5J9E1_9PHAE9.070e-1844.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGY1_9PHAE9.210e-1844.68Integrase catalytic domain-containing protein n=7 ... [more]
A0A6H5KBY7_9PHAE9.210e-1844.68Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1943contigH-paniculata_contig1943:4071..4358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1943.4912.1mRNA_H-paniculata_contig1943.4912.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1943 3397..6108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1943.4912.1 ID=prot_H-paniculata_contig1943.4912.1|Name=mRNA_H-paniculata_contig1943.4912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
MVLYFRHLLSTANLKQEHSTRIVEDNMGTGKLSRSVNVNDRTKHIDIKFH
DVRSLVKDNVVNVQNVSTKLQTADVLTQRWDAVKVLRSRMMLMGN*
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