prot_H-paniculata_contig19387.4900.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19387.4900.1
Unique Nameprot_H-paniculata_contig19387.4900.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
BLAST of mRNA_H-paniculata_contig19387.4900.1 vs. uniprot
Match: D7FMU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMU7_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.300e-29
Identity = 121/364 (33.24%), Postives = 148/364 (40.66%), Query Frame = 0
Query:   21 MCRYNRLVRYYEALGFRQPKGSRVHYLHNNDQLFRKVPMRRPLAPTLPPRARRSNGLAVRGGSFLLVRLQAKTGGFVRSTADGNVSAAXXXXXXXXXXXXXXXXXXXPSAVAPALKSGAE-----SGRSSLGSLRKDTNPGGDSSGGGAAM------------GEFSVGVG----GGGVCGRHGXXXXXXXXXXXXXXXSADHWILMQEGDLVRDEDTQAVQPTGGRGTEPAL-------------------------------------------------------------------------EGKCTLCTAFRYIPGRGIVCFESAAYGKYLCVEPDGKVIADRSWDNSWEQFRLERFSD 290
            M +YN LVRYYE LGF+Q +GS+VHY H+ DQ++RK+PM R ++    PR+RRS  L   GG FL+VRLQ K G FVRSTADG+V +                     +A A A     E     +G   +G  R  +  G +S+ G  A             GE + G G    G G     G                 + W    EGD  R     +   +GG GT                                                                              G   L T   +   RGIVCFESA YGKYLCVEPDGKV+ADRSWDNSWEQFRLERF+D
Sbjct:    1 MGKYNHLVRYYEDLGFKQLEGSKVHYEHHCDQVYRKIPMIRQVSARAQPRSRRSPRLVDNGGWFLVVRLQTKAGSFVRSTADGDVVSPGALNNASATAST--------TAAAHAADVDTEEDCENAGDCCMGHARSSSGSGAESTCGALAAAXXXXXRASLATGEAATGWGSCGGGDGCAAPAGRGLAATAAAPTIAGGVVEEWSA-GEGD--RKCGGSSSGGSGGFGTNSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGRGTDHLWTLMVH-EVRGIVCFESA-YGKYLCVEPDGKVVADRSWDNSWEQFRLERFAD 351          
BLAST of mRNA_H-paniculata_contig19387.4900.1 vs. uniprot
Match: A0A835Z6V2_9STRA (Inositol oxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6V2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.150e-22
Identity = 104/287 (36.24%), Postives = 134/287 (46.69%), Query Frame = 0
Query:    1 VFATLGRLSVPEIRLEAEEDMCRYNRLVRYYEALGFRQPKGSRV-HYLHNNDQLFRKVPMRRPLAPTLPPRARRSNGLAVRGGSFLLVRLQAKTGGFVRSTADGNVSAAXXXXXXXXXXXXXXXXXXXPSAVAPALKSGAESGRSSLGSLRKDTNPGGDSSGGGAAMGEFSVGVGGGGVCGRHGXXXXXXXXXXXXXXXSADHWILMQEGDLVRDEDTQAVQPTGGRGTEPALEGKCTLCTAFRYIPGRGIVCFESAAYGKYLCVEPDGKVIADRSWDNSWEQFRLE 286
            +FA + RL VP+IRLEAEED  R+NRLVR+YE LGF    G+ V H  H ++  +R VPM R L          ++     G +FLLVR++A+ G FVR+ ADG+++                      +A A A  + AE                       A  GE      G G      XXXXXXXXXXXXXXX    WIL+QE                                        G+VCFES+ YG++LC EPDGKV+ADR WD++WE F +E
Sbjct:  165 LFAAVARLGVPQIRLEAEEDTRRHNRLVRFYEGLGFAVRDGASVLHLAHGDETTYRSVPMYRVLRGDAFDAYAAAHTPLAEGAAFLLVRMRARGGAFVRAAADGSLAV---------------------TAAAAAQAATAE-----------------------ARTGERCCEGEGEGXX----XXXXXXXXXXXXXXXXXXRWILLQEA--------------------------------------AGMVCFESS-YGRFLCAEPDGKVVADRRWDDAWEHFSVE 364          
BLAST of mRNA_H-paniculata_contig19387.4900.1 vs. uniprot
Match: A0A6H5KR05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR05_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.590e-15
Identity = 38/43 (88.37%), Postives = 41/43 (95.35%), Query Frame = 0
Query:  248 RGIVCFESAAYGKYLCVEPDGKVIADRSWDNSWEQFRLERFSD 290
            RGIVCFESA YGKYLCVEPDGKV+ADR WDNSWEQF+LERF+D
Sbjct:  319 RGIVCFESA-YGKYLCVEPDGKVVADRPWDNSWEQFKLERFAD 360          
BLAST of mRNA_H-paniculata_contig19387.4900.1 vs. uniprot
Match: A0A7S1B568_9STRA (Inositol oxygenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B568_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.950e-5
Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   13 IRLEAEEDMCRYNRLVRYYEALGFRQPKGSRVHYLHNND-QLFRKVPMRRPL 63
            + L+AEEDM RYNRLVR+Y+ LG +    +R+ Y++NND + +RK+PM R L
Sbjct:   75 VLLDAEEDMSRYNRLVRFYKQLGCQVKPNTRIQYINNNDGETYRKIPMYRGL 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19387.4900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMU7_ECTSI1.300e-2933.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6V2_9STRA1.150e-2236.24Inositol oxygenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A6H5KR05_9PHAE1.590e-1588.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1B568_9STRA2.950e-551.92Inositol oxygenase n=1 Tax=Corethron hystrix TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.80.10.50coord: 239..290
e-value: 9.0E-7
score: 30.9
IPR008999Actin-crosslinkingSUPERFAMILY50405Actin-crosslinking proteinscoord: 243..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19387contigH-paniculata_contig19387:1098..4413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19387.4900.1mRNA_H-paniculata_contig19387.4900.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19387 1098..4413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19387.4900.1 ID=prot_H-paniculata_contig19387.4900.1|Name=mRNA_H-paniculata_contig19387.4900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
VFATLGRLSVPEIRLEAEEDMCRYNRLVRYYEALGFRQPKGSRVHYLHNN
DQLFRKVPMRRPLAPTLPPRARRSNGLAVRGGSFLLVRLQAKTGGFVRST
ADGNVSAAAAAARAASASPSSSSSSCSPSAVAPALKSGAESGRSSLGSLR
KDTNPGGDSSGGGAAMGEFSVGVGGGGVCGRHGGGAGGKGGVGGGGGGSA
DHWILMQEGDLVRDEDTQAVQPTGGRGTEPALEGKCTLCTAFRYIPGRGI
VCFESAAYGKYLCVEPDGKVIADRSWDNSWEQFRLERFSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008999Actin-crosslinking