prot_H-paniculata_contig19267.4859.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19267.4859.1
Unique Nameprot_H-paniculata_contig19267.4859.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
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BLAST of mRNA_H-paniculata_contig19267.4859.1 vs. uniprot
Match: D7FK72_ECTSI (Rab32L, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK72_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.380e-31
Identity = 56/88 (63.64%), Postives = 72/88 (81.82%), Query Frame = 0 
Query:    1 YACSAKENSNVDLAIKEVLRQAIKGGGVKNDFSEVPASDLEALNEEMDKLNAPGVERERSPGQQVLRDHQWFGTQTVAKSPGCACVVS 88
            YA SAK+NSN+DLAIKEVLR+A++G   ++ F E+   D++AL+EE+ +LN PG +RERSPGQQ+LRDHQWFGTQ V+   GCACVVS
Sbjct:  211 YATSAKDNSNIDLAIKEVLRRALQGSA-RSAFGELEQDDVDALDEELTQLNGPGSDRERSPGQQILRDHQWFGTQNVSTKQGCACVVS 297
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19267.4859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK72_ECTSI1.380e-3163.64Rab32L, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19267contigH-paniculata_contig19267:130..1532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19267.4859.1mRNA_H-paniculata_contig19267.4859.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19267 130..1532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19267.4859.1 ID=prot_H-paniculata_contig19267.4859.1|Name=mRNA_H-paniculata_contig19267.4859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
YACSAKENSNVDLAIKEVLRQAIKGGGVKNDFSEVPASDLEALNEEMDKL
NAPGVERERSPGQQVLRDHQWFGTQTVAKSPGCACVVS*
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