prot_H-paniculata_contig19184.4822.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19184.4822.1
Unique Nameprot_H-paniculata_contig19184.4822.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
[Close]
BLAST of mRNA_H-paniculata_contig19184.4822.1 vs. uniprot
Match: D8LB68_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB68_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 8.590e-37
Identity = 68/91 (74.73%), Postives = 80/91 (87.91%), Query Frame = 0 
Query:    2 DILSILPPYLRIPAVLYAYRASLPRLPLLCKIEEGFPGFLGIMLPRLRPGEYAKGDTIVSPRLVAQEMGFVLHGICDAAAAETGETLETYR 92
            +ILSILPPYLRIPAVLYAYR ++PRLPLLCKIE  +PGFL +MLPRL+PGEY KGD IVS RL AQEMGFVLHG+C+  +A+TGET++ YR
Sbjct: 1663 EILSILPPYLRIPAVLYAYRTAVPRLPLLCKIEMSYPGFLAMMLPRLKPGEYVKGDLIVSRRLAAQEMGFVLHGVCEETSADTGETIQNYR 1753
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19184.4822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB68_ECTSI8.590e-3774.73Cyclic nucleotide-binding domain-containing protei... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 1..155
e-value: 3.7E-14
score: 54.7
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 44..136
score: 7.596
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 2..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19184contigH-paniculata_contig19184:2115..4681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19184.4822.1mRNA_H-paniculata_contig19184.4822.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19184 2100..4681 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19184.4822.1 ID=prot_H-paniculata_contig19184.4822.1|Name=mRNA_H-paniculata_contig19184.4822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MDILSILPPYLRIPAVLYAYRASLPRLPLLCKIEEGFPGFLGIMLPRLRP
GEYAKGDTIVSPRLVAQEMGFVLHGICDAAAAETGETLETYREGQYLGHA
TLLVPDGVTFKILVEVKASMRVEMLFLHKSDFDWLLTFYPPPMEKFRDEL
TDWEQLLRWISLPKVFTKKIKRLLGRAPSIIGGGQTDHSNSDRGKYSAAG
LAAAIIAASGR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like