prot_H-paniculata_contig1906.4778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1906.4778.1
Unique Nameprot_H-paniculata_contig1906.4778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.950e-42
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 0
Query:    1 MSADGPSTRVQFLSSVATAAVAATSSAVMLPSLALAEE-----KQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDTQVKLL 110
            MSA+GPS R QFL++  +AAVAA  SAVMLP +A+A+E     KQV L TTKLGG+LEPFAD SKGYRLAKPLGWNRYDG SGEY VKMVDLVDPT +ILLTNSPVKSDT++  L
Sbjct:   38 MSAEGPSDRAQFLTT--SAAVAA--SAVMLPLVAVADEGETGSKQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTL 148          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A7S3LCU1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCU1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.870e-16
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   22 AATSSAVMLPSLALAEE--KQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDTQ 106
            A TS+AV+LP+L    E  +      T++GG LEPF D ++G RL  P GWN++DG  G Y +K  DLVDPTE I L++SPVKS T+
Sbjct:   36 ALTSAAVLLPNLPAQAEVTEDTPRVVTRMGGLLEPFQDGTRGIRLMAPSGWNKFDGEVGAYDIKWQDLVDPTENIKLSSSPVKSTTE 122          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A7S2YI26_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YI26_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 9.710e-14
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 0
Query:   19 AAVAATSSAVMLPSLALAEEKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDTQ 106
            A VA ++ A  + S A+A+E      TT++GG LEPF D  +  R+  P GWN++DG  G + +K  DLVDPTE I +T+SPVKS T+
Sbjct:   46 AVVATSTLAAPIASAAVADETP--RVTTRMGGLLEPFQDGPRSIRMMAPSGWNKFDGEVGAFDLKWQDLVDPTENIKITSSPVKSTTE 131          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A7S3C4X1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C4X1_9EUKA)

HSP 1 Score: 73.2 bits (178), Expect = 2.120e-13
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   30 LPSLALAEEKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDTQVKLL 110
            L + A+AEE   S    K+GG LEPF +TSKG++L KP GW +YD   G Y VK  D++DP E +++++ PV++ T V  L
Sbjct:   68 LAACAVAEEPGFS----KMGGLLEPFIETSKGFKLYKPSGWTQYDTDPGVYDVKFADIIDPFETVIVSSQPVQTATSVSAL 144          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A8J6C9Q6_DIALT (PsbP domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9Q6_DIALT)

HSP 1 Score: 73.2 bits (178), Expect = 2.150e-13
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   28 VMLPSLALAEEKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKS 103
            V LP+LA    +++S +TT++GG L+ F+D SKG+ + KP  WN++DG  GEY  K  DL+  TE I++++SPV S
Sbjct:   63 VALPALAADGVREISPSTTRMGGLLDAFSDISKGFSVYKPSTWNKFDGTPGEYEAKWQDLIGYTEQIIVSSSPVTS 138          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A7S2A319_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A319_TRICV)

HSP 1 Score: 71.2 bits (173), Expect = 1.040e-12
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 0
Query:   30 LPSLALAEEKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDT 105
            LP++A   E+   +TT ++GG LEP+ D+++G+R   P GWN++DG  G Y  K  DLVD TE I L+++PVKS T
Sbjct:   56 LPAIAAVTEETPRITT-RMGGLLEPYQDSTRGWRTLVPSGWNKFDGEVGAYDTKWQDLVDNTENIKLSSTPVKSTT 130          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A7S2RMC0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RMC0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.050e-12
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   30 LPSLALAE-EKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDT 105
            LPS+A A  E++V+  TT++GG LE + DT++G  L  P GWN+++G  G Y +K  DLV+ TE I ++++PVKS T
Sbjct:   55 LPSMAFAAPEEEVARITTRMGGNLERYGDTTRGLSLMVPSGWNKFEGEVGAYDLKWEDLVEKTENIKISSTPVKSTT 131          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A7S2PDK0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDK0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 6.540e-12
Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   30 LPSLALA-EEKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDT 105
            LP++ALA    +   TTT++GG LE + D+++G+ +  P GWN+++G  G Y VK  DLVDP E I ++++PVKS T
Sbjct:   66 LPNVALAYPSDETPKTTTRMGGLLEKYQDSTRGWTILCPSGWNKFEGEVGAYDVKWQDLVDPRENIKVSSTPVKSTT 142          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: B7G6V4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6V4_PHATC)

HSP 1 Score: 67.4 bits (163), Expect = 2.750e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 0
Query:    6 PSTRVQFLSSVATAAVAATSSAVMLPSLALAEEKQVSLTTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDTQ 106
            P +R Q   +  +AAV   SS +    +      +     T++GG LE F D  +G+R+  P GWN+++G  G Y VK  DLVDP+E + ++++PVKS T+
Sbjct:   26 PLSRRQAFQAATSAAVIGVSSTIAGHPVQAYPSDETPRVATRMGGLLEAFQDGPRGFRIMIPSGWNKFEGEVGAYDVKWQDLVDPSENVKISSTPVKSTTE 126          
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Match: A0A0M0JUJ4_9EUKA (Photosystem ii oxygen evolving complex protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUJ4_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 4.440e-11
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   44 TTTKLGGQLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSPVKSDTQVKLL 110
            T +K+GG LEP+ DT KGY+L  P GWN+++   G Y VK  D+++P   + ++ SPV + T V  L
Sbjct:   54 TFSKMGGLLEPYIDTQKGYKLYSPKGWNKFESDPGVYDVKFQDVIEPETTVQVSTSPVATATSVSAL 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1906.4778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LJF7_ECTSI4.950e-4273.04Photosystem II oxygen evolution complex protein Ps... [more]
A0A7S3LCU1_9STRA1.870e-1650.57Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2YI26_9STRA9.710e-1446.59Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3C4X1_9EUKA2.120e-1345.68Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A8J6C9Q6_DIALT2.150e-1346.05PsbP domain-containing protein n=1 Tax=Diacronema ... [more]
A0A7S2A319_TRICV1.040e-1247.37Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2RMC0_9STRA1.050e-1246.75Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2PDK0_9STRA6.540e-1245.45Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7G6V4_PHATC2.750e-1136.63Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A0M0JUJ4_9EUKA4.440e-1143.28Photosystem ii oxygen evolving complex protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 40..114
e-value: 7.1E-9
score: 37.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..114
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..36
score: 8.587

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1906contigH-paniculata_contig1906:22581..23815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1906.4778.1mRNA_H-paniculata_contig1906.4778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1906 22581..23815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1906.4778.1 ID=prot_H-paniculata_contig1906.4778.1|Name=mRNA_H-paniculata_contig1906.4778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MSADGPSTRVQFLSSVATAAVAATSSAVMLPSLALAEEKQVSLTTTKLGG
QLEPFADTSKGYRLAKPLGWNRYDGASGEYVVKMVDLVDPTEVILLTNSP
VKSDTQVKLLTTIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR006311TAT_signal