prot_H-paniculata_contig19050.4775.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19050.4775.1
Unique Nameprot_H-paniculata_contig19050.4775.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0A6S4QRE4_9PHAE (Photosystem I P700 apoprotein A1 (Fragment) n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A6S4QRE4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.490e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  434 HLLAPSSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 495
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0ELG5_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=5 Tax=Phaeophyceae TaxID=2870 RepID=A0ELG5_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A1L0R0_9PHAE (Photosystem I P700 apoprotein A1 (Fragment) n=7 Tax=Ectocarpales TaxID=2877 RepID=A1L0R0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0ELH4_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=1 Tax=Petalonia zosterifolia TaxID=87241 RepID=A0ELH4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: B6CWP9_9PHAE (PSI P700 chlorophyll a apoprotein A1 (Fragment) n=1 Tax=Heribaudiella fluviatilis TaxID=246117 RepID=B6CWP9_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: U3SYE4_9PHAE (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) n=103 Tax=Phaeophyceae TaxID=2870 RepID=U3SYE4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.230e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  446 HLLAPSSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 507
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0A8E4UPV3_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A8E4UPV3_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.350e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  396 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 457
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: D1H064_9PHAE (Photosystem I core protein A (Fragment) n=4 Tax=Ectocarpus TaxID=2879 RepID=D1H064_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: Q5VK95_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=16 Tax=Phaeophyceae TaxID=2870 RepID=Q5VK95_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
[Close]
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0A2U9IYZ8_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=1 Tax=Tronoella ryukyuana TaxID=2203893 RepID=A0A2U9IYZ8_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S4QRE4_9PHAE1.490e-2688.71Photosystem I P700 apoprotein A1 (Fragment) n=3 Ta... [more]
A0ELG5_9PHAE1.950e-2688.71Photosystem I P700 Chl a apoprotein A1 (Fragment) ... [more]
A1L0R0_9PHAE1.950e-2688.71Photosystem I P700 apoprotein A1 (Fragment) n=7 Ta... [more]
A0ELH4_9PHAE1.950e-2688.71Photosystem I P700 Chl a apoprotein A1 (Fragment) ... [more]
B6CWP9_9PHAE1.950e-2688.71PSI P700 chlorophyll a apoprotein A1 (Fragment) n=... [more]
U3SYE4_9PHAE2.230e-2688.71Photosystem I P700 chlorophyll a apoprotein A1 (Fr... [more]
A0A8E4UPV3_9PHAE2.350e-2687.10Photosystem I P700 Chl a apoprotein A1 (Fragment) ... [more]
D1H064_9PHAE2.690e-2687.10Photosystem I core protein A (Fragment) n=4 Tax=Ec... [more]
Q5VK95_9PHAE2.690e-2687.10Photosystem I P700 Chl a apoprotein A1 (Fragment) ... [more]
A0A2U9IYZ8_9PHAE2.690e-2687.10Photosystem I P700 Chl a apoprotein A1 (Fragment) ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10coord: 1..62
e-value: 2.2E-17
score: 64.1
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 12..62
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 4..62
e-value: 2.2E-16
score: 59.3
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 1..62
NoneNo IPR availablePANTHERPTHR30128:SF49PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1coord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19050contigH-paniculata_contig19050:4..189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19050.4775.1mRNA_H-paniculata_contig19050.4775.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19050 4..190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19050.4775.1 ID=prot_H-paniculata_contig19050.4775.1|Name=mRNA_H-paniculata_contig19050.4775.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHA
FTLHVTVLILLK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036408PSI_PsaA/B_sf
IPR001280PSI_PsaA/B