prot_H-paniculata_contig1896.4738.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1896.4738.1
Unique Nameprot_H-paniculata_contig1896.4738.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 2.260e-115
Identity = 177/233 (75.97%), Postives = 205/233 (87.98%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHG-KDDPSAPPSPRFSPKRKNKAKGQGG 232
            V++GTF  SL EGLR+HTGTAAFGSL+IAIIK IRA+LTY+QKKL+ SG+K AQA++CCLSCFFW LEKCVKFINKNAY+QVAIFST+FC SSKNAFWLIARNLGRVGAVTVVT+FVVFIMKLVIGLGTAGATYVFLQ +M D+LYSP+GPV FAG +A+YVASSFA LLGMTT+TILQCFIADEEMF+  DRYARNDLK+WL  HG  ++PS+P +P+    RK   + +GG
Sbjct:  414 VNNGTFWKSLKEGLRFHTGTAAFGSLIIAIIKTIRAMLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVKFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLVIGLGTAGATYVFLQNFMKDDLYSPMGPVFFAGVMAYYVASSFAALLGMTTLTILQCFIADEEMFEGEDRYARNDLKDWLDAHGVNEEPSSPRTPKKKGGRKGGEEKEGG 646          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 2.680e-90
Identity = 150/224 (66.96%), Postives = 178/224 (79.46%), Query Frame = 0
Query:   22 AFGSLVIAIIKM-----------IRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKL---------------VIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHG-KDDPSAPPSPR 218
            A G +V+A+  +           IRAVLTY+QKKL+ SG+K AQA++CCLSCFFW LEKCV+FINKNAY+QVAIFST+FC SSKNAFWLIARNLGRVGAVTVVT+FVVFIMKL               VIGLGTAG TYVFLQ++M ++LYSP+GPV FAG +A+YVASSFA LLGMTT+TILQCFIADEEMF+  DRYARNDLK+WL  HG  ++PS+P +P+
Sbjct:  465 AMGQIVVALTVVKYYFTRDVETTIRAVLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVRFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLLCITPTCIFRVKLTQVIGLGTAGVTYVFLQKFMKEDLYSPMGPVFFAGVMAYYVASSFAALLGMTTLTILQCFIADEEMFEGEDRYARNDLKDWLDAHGVNEEPSSPRTPK 688          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 253 bits (645), Expect = 7.620e-77
Identity = 123/207 (59.42%), Postives = 159/207 (76.81%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHG 207
            + SGTF  ++ +G+ YH GTAAFGSL+IAII+MIRA++ + QKK + SGNK+AQ  +CC  C FW L+KC++FINKNAY+Q A+FST FC S K AF+LIARN+ RVGAV++V+EF++ IMKLVI L T  ATY+ L   + +EL+S VGP +F G LA+ VAS FA L  MTT TILQCFIADEEM+   +RYA NDLK+++  HG
Sbjct:  405 LGSGTFFKAMKDGMWYHMGTAAFGSLIIAIIQMIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMIIIMKLVICLATMAATYLGLDATIGNELHSFVGPTIFVGVLAYLVASVFAELFSMTTATILQCFIADEEMYSPAERYADNDLKDFVNTHG 611          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 3.280e-66
Identity = 108/207 (52.17%), Postives = 143/207 (69.08%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHG 207
            V S T  +S+ +   +H GTAAFG L++AI++MIRA+LTYIQKK   SGNK+ Q I CC  C FW LE C++FINKNAYVQ AIFSTNFCTS++NAF+LIARN+ RV AVT++ EFV+ +M + + + T    YV +   +  +L S VGP +    LA+Y      G+ GM   TILQCF+ADEE+F    ++A NDL+ W+ KHG
Sbjct:  384 VGSLTVVSSVGKTFAFHIGTAAFGGLIVAIVEMIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVTILGEFVLNVMTVFVCIVTTLGVYVAMDSNIRSQLNSLVGPTIMTAVLAYYTGKMVTGVYGMAITTILQCFVADEELFPPTQQFAENDLRGWVDKHG 590          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A7S2HA85_9STRA (Choline transporter-like protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HA85_9STRA)

HSP 1 Score: 212 bits (539), Expect = 4.720e-61
Identity = 102/210 (48.57%), Postives = 142/210 (67.62%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHGKDD 210
            VDSGT   SL +   YH GTAAFGSL++AIIK+IR+++ Y Q+K + + +K+A  ++CC    FW LEKC++F+NKNAY+  AIFST+FCTS+K AF+LI RN  R+GA+  V+  V+F+ K  I   T    Y+ + + +  EL S VGPV+    +A+ VA+ F  +  M   TILQCFIADEEMFD  + YA  DL+EW+ K+ + D
Sbjct:  466 VDSGTVWESLCDSCWYHMGTAAFGSLILAIIKIIRSIIAYFQEKAKEADSKIAGCVLCCCQXXFWCLEKCIRFLNKNAYIHTAIFSTSFCTSAKEAFFLILRNALRIGAIEYVSGAVIFVGKAFIACLTGACAYILIDQQIGHELDSVVGPVILVVLMAYSVAAMFMSVFDMGIATILQCFIADEEMFDGDEMYAEGDLREWIDKYDESD 675          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A7S4QYJ3_9STRA (Choline transporter-like protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYJ3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.170e-58
Identity = 99/213 (46.48%), Postives = 139/213 (65.26%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHGKDDPSA 213
            V SG    S+ +   YH GTAAFG+L++AIIK+IR ++ Y QKK + + +K+A A++CC  C F+ LEKCVKF+NKNAY+  AIF+TNFCTS++ AF+LI RN  R+GA+  V+  V+F+ K  I   T G  Y  +   +  EL S VGP++    LA+ V++ F  +  +   TILQCFIADEEMFD    YA   L+ ++ K+   DPS+
Sbjct:   46 VGSGQVWESVCDVCWYHMGTAAFGALILAIIKLIRTIIAYFQKKAKEADSKIATAVLCCCQCCFYCLEKCVKFLNKNAYIHTAIFATNFCTSAREAFFLILRNAARIGAIGYVSGAVIFVGKAFIASLTGGLAYFAIDTQIGMELNSIVGPIVLIILLAYSVSAMFMSVFDLGIATILQCFIADEEMFDGDQMYAEGSLRAYIDKY---DPSS 255          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: B8C577_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C577_THAPS)

HSP 1 Score: 194 bits (492), Expect = 1.560e-57
Identity = 92/186 (49.46%), Postives = 132/186 (70.97%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEE 186
            + S T  TS++  + YH+GTAAFGSL+IAIIKMIR+ L Y+Q+K     + +A+A++CC       LEKC++F+NKNAY+Q AIF ++FCTS+K AF+LI RN  R+ A+T V+  V+FI K+ I   T GA YV++ + + DELYS +GP+ F  A+++++A  F G+  M   TILQCF+ADEE
Sbjct:  129 IGSATVWTSIATSMWYHSGTAAFGSLIIAIIKMIRSFLAYLQRKAEEMDSSIAKAVLCCFQXXXXXLEKCMRFLNKNAYIQTAIFGSSFCTSAKEAFFLILRNAARIAAITYVSGGVMFIGKVFITSLTTGAAYVYMDQEIGDELYSIIGPLFFIAAISWFIAGMFMGVYDMGIATILQCFVADEE 314          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A1Z5JIP5_FISSO (Choline transporter-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIP5_FISSO)

HSP 1 Score: 202 bits (514), Expect = 1.980e-57
Identity = 100/207 (48.31%), Postives = 139/207 (67.15%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHG 207
            V S T  +S+ E + YH GT A+GSL++AI++ IR ++  +QKK + + NK+A+ I+CC  C FW LE+C+KFINKNAY+Q AIFST+FC S + +F+LI RN  RVGAVT V+  V+ I KL I   T G  Y+ + E +SDEL+S  GPV     +A++++  F G+  M   T+L CFIADEEMF     YA   LK+++ KHG
Sbjct:  470 VGSWTVISSVRETVTYHLGTCAYGSLLVAIVQFIRYIIAKLQKKAKETQNKIAEYILCCCQCCFWCLERCLKFINKNAYIQTAIFSTSFCKSCRASFFLIFRNAARVGAVTYVSSAVLIIGKLFISAVTTGFAYIAITERLSDELFSVGGPVTITFLIAYWMSDFFMGVFDMAISTVLHCFIADEEMFGGNGSYADQHLKDYVDKHG 676          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: W7TBK4_9STRA (Choline transporter-like protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBK4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 5.070e-57
Identity = 95/207 (45.89%), Postives = 141/207 (68.12%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHG 207
            + SGT C ++     YH GTAAFGSLVIA+++ IR+++ YIQK L+ S NK+AQ ++CC  C FW LEK +KF+NKNAY+Q A+  T+FCTS K AF+LIARN+ R+GAV++V+EFV+ I K+ + +     ++  +  ++ D ++SP+GP +    LA++ A  F  +  M    +LQ FIADEEMF  G+RYA   L  ++ ++G
Sbjct:  446 IGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENG 652          
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Match: A0A7S2V489_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V489_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.240e-57
Identity = 97/209 (46.41%), Postives = 140/209 (66.99%), Query Frame = 0
Query:    1 VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGNKLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLIARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVGPVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLKEWLRKHGKD 209
            + S T   S+   + YH+GT AFGSL+IAIIK IRAV++YIQKK   SGNK+A A++CC+      +EKC+KF+NKNAY+Q AI+  +FC +++ AF+LIARN+ R+ AV +V  +V+FI K+VI L      ++ +   MSD+L+    P +F   LA++V+  F  + GM   TILQCF+ADEEM++  +R+A  DL   + K  KD
Sbjct:  166 IGSSTVFKSIKMSMWYHSGTCAFGSLIIAIIKTIRAVVSYIQKKAAKSGNKIAVALLCCIQXXXXXIEKCMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRITAVALVGNYVLFIGKMVITLLATFLAFLVMDSTMSDKLHGLYAPTIFTFILAYFVSLMFVEVFGMAIYTILQCFVADEEMYEPAERFATGDLATTINKTNKD 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1896.4738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ7_ECTSI2.260e-11575.97Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L007_9PHAE2.680e-9066.96Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA7.620e-7759.42Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A6H5JW76_9PHAE3.280e-6652.17Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S2HA85_9STRA4.720e-6148.57Choline transporter-like protein n=1 Tax=Helicothe... [more]
A0A7S4QYJ3_9STRA2.170e-5846.48Choline transporter-like protein n=1 Tax=Ditylum b... [more]
B8C577_THAPS1.560e-5749.46Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A1Z5JIP5_FISSO1.980e-5748.31Choline transporter-like protein n=2 Tax=Fistulife... [more]
W7TBK4_9STRA5.070e-5745.89Choline transporter-like protein n=6 Tax=Monodopsi... [more]
A0A7S2V489_9STRA6.240e-5746.41Choline transporter-like protein n=1 Tax=Fibrocaps... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 5..186
e-value: 6.8E-56
score: 189.8
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 5..193
NoneNo IPR availablePANTHERPTHR12385:SF14CTL-LIKE PROTEIN 2coord: 5..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..232
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..49
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1896contigH-paniculata_contig1896:14808..23680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1896.4738.1mRNA_H-paniculata_contig1896.4738.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1896 14808..23680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1896.4738.1 ID=prot_H-paniculata_contig1896.4738.1|Name=mRNA_H-paniculata_contig1896.4738.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
VDSGTFCTSLSEGLRYHTGTAAFGSLVIAIIKMIRAVLTYIQKKLRHSGN
KLAQAIMCCLSCFFWLLEKCVKFINKNAYVQVAIFSTNFCTSSKNAFWLI
ARNLGRVGAVTVVTEFVVFIMKLVIGLGTAGATYVFLQEYMSDELYSPVG
PVLFAGALAFYVASSFAGLLGMTTVTILQCFIADEEMFDVGDRYARNDLK
EWLRKHGKDDPSAPPSPRFSPKRKNKAKGQGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like