prot_H-paniculata_contig18885.4712.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18885.4712.1
Unique Nameprot_H-paniculata_contig18885.4712.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length139
Homology
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A6H5JI55_9PHAE (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI55_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 2.480e-57
Identity = 95/112 (84.82%), Postives = 105/112 (93.75%), Query Frame = 0
Query:   26 RAKVDESTRKTWSLAARSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            + K+DESTR+TWS+ +R  EI+A K DGALA+SMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDR+GGKVMKRADG GNG+DAAL+ARDDPNYARTVYDAYNDREV
Sbjct:  162 KVKLDESTRQTWSMGSRDAEIKAQKGDGALAVSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRSGGKVMKRADGTGNGIDAALSARDDPNYARTVYDAYNDREV 273          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A836CBU6_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.960e-33
Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = 0
Query:   50 KRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            +RDG LA +  +H DDLSSDDDEE+RNT+GRVPLHWYDEYDHIGYDR+G +++K      +GVDAALAA DDPN++RTVYDAYNDR V
Sbjct:   16 RRDGTLAAAQYLHVDDLSSDDDEESRNTIGRVPLHWYDEYDHIGYDRSGKQILKGP--AMDGVDAALAASDDPNFSRTVYDAYNDRRV 101          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A2P4YA88_9STRA (BOP1NT domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YA88_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.680e-31
Identity = 56/96 (58.33%), Postives = 77/96 (80.21%), Query Frame = 0
Query:   42 RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            R KE++  + DG+L+++  +H DDLSSDD EEN NT+G VPL WY++YDHIGY+ +G K+MK  +G  +G+D A+AA+DDPNY RTVYDAYNDR++
Sbjct:   62 REKEVQKMREDGSLSLASQLHVDDLSSDD-EENVNTIGNVPLRWYEDYDHIGYNVDGKKIMKSNNG--DGIDNAIAAKDDPNYDRTVYDAYNDRKI 154          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: W7T295_9STRA (Transducin family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T295_9STRA)

HSP 1 Score: 120 bits (302), Expect = 8.680e-31
Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:   42 RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENR----NTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            R++EIE  +  G LA++ AMH DDLSSDD+ E      N +GRVPLHWYDEY+H+GYD  G KVM+     G+G+DAALA+RDDPNY RTVYDA NDR V
Sbjct:  121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGR--KGDGLDAALASRDDPNYGRTVYDAVNDRHV 218          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A4D9CM67_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CM67_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.320e-29
Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:   42 RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEEN----RNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            R++EIEA +  G LA++ AMH DDLSSDD+ E     RN +GRVPLHWYDEY+H+GY+  G KVM+     G+G+DAALA+RDDPNY RTVYDA NDR V
Sbjct:  216 RAEEIEAERASGRLAVAAAMHADDLSSDDEGEGEGRVRNAIGRVPLHWYDEYEHMGYNLQGKKVMRGR--KGDGLDAALASRDDPNYGRTVYDAVNDRHV 313          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: D0N0A8_PHYIT (Ribosome biogenesis protein BOP1 homolog n=4 Tax=Phytophthora TaxID=4783 RepID=D0N0A8_PHYIT)

HSP 1 Score: 120 bits (300), Expect = 8.190e-29
Identity = 56/96 (58.33%), Postives = 77/96 (80.21%), Query Frame = 0
Query:   42 RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            R KE++  + DG+L+++  +H DDLSSDD EEN NT+G VPL WY++YDHIGY+ +G K+MK  +G  +G+D A+AA+DDPNY RTVYDAYNDR++
Sbjct:   73 REKEVQKMREDGSLSVASQLHVDDLSSDD-EENVNTIGNVPLRWYEDYDHIGYNVDGKKIMKSNNG--DGIDNAIAAKDDPNYDRTVYDAYNDRKI 165          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A484DSD7_BRELC (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSD7_BRELC)

HSP 1 Score: 119 bits (298), Expect = 1.550e-28
Identity = 60/114 (52.63%), Postives = 84/114 (73.68%), Query Frame = 0
Query:   25 GRAKVDESTRKTWSLAA-RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            G A++ E  +KT      R KE++  + DG+L+++  +H DDLSSDD EEN NT+G VPL WY++YDHIGY+  G K+M+  +G  +G+D A+AA+DDPNY RTVYDAYNDR++
Sbjct:   91 GDAELSELEKKTRRFTVDREKEMQKMREDGSLSLASQLHVDDLSSDD-EENVNTIGNVPLRWYEDYDHIGYNVEGTKIMRSNNG--DGIDNAIAAKDDPNYDRTVYDAYNDRKI 201          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A0P1AAJ0_PLAHL (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAJ0_PLAHL)

HSP 1 Score: 119 bits (298), Expect = 1.560e-28
Identity = 56/96 (58.33%), Postives = 77/96 (80.21%), Query Frame = 0
Query:   42 RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            R +E++  + DG+L+++  +H DDLSSDD EEN NT+G VPL WY++YDHIGY+ +G KVMK  +G  +G+D A+AA+DDPNY RTVYDAYNDR++
Sbjct:  158 REREVQKMREDGSLSVASRLHVDDLSSDD-EENVNTIGNVPLRWYEDYDHIGYNIDGKKVMKSNNG--DGIDNAIAAKDDPNYDRTVYDAYNDRKI 250          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A2D4BT84_PYTIN (Ribosome biogenesis protein BOP1 homolog n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BT84_PYTIN)

HSP 1 Score: 118 bits (296), Expect = 2.680e-28
Identity = 54/92 (58.70%), Postives = 74/92 (80.43%), Query Frame = 0
Query:   46 IEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            ++  + DG+L ++  +H DDLSSDD EEN NT+G VPL WYD+YDHIGYD +G K++ R++  G+G+D A+AA+DDPNY RTVYDAYNDR++
Sbjct:    1 MQQMREDGSLEIAKQLHVDDLSSDD-EENINTIGNVPLRWYDDYDHIGYDVSGKKIL-RSNAAGDGIDNAIAAKDDPNYDRTVYDAYNDRKI 90          
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Match: A0A421FF26_9STRA (Ribosome biogenesis protein BOP1 homolog n=6 Tax=Phytophthora TaxID=4783 RepID=A0A421FF26_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.890e-28
Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 0
Query:   42 RSKEIEAAKRDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGKVMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREV 137
            R KE++  + DG+L ++  +H DDLSSDD EEN NT+G VPL WY+EYDHIGY+ +G ++MK  +G  +G+D A+AA+DDPNY RTVYDAYNDR++
Sbjct:  121 REKEVQKMRDDGSLQIASQLHVDDLSSDD-EENVNTIGNVPLRWYEEYDHIGYNVDGKRIMKSNNG--DGIDNAIAAKDDPNYDRTVYDAYNDRKI 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18885.4712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI55_9PHAE2.480e-5784.82Ribosome biogenesis protein BOP1 homolog n=1 Tax=E... [more]
A0A836CBU6_9STRA1.960e-3370.45Ribosome biogenesis protein BOP1 homolog n=1 Tax=T... [more]
A0A2P4YA88_9STRA1.680e-3158.33BOP1NT domain-containing protein (Fragment) n=1 Ta... [more]
W7T295_9STRA8.680e-3161.00Transducin family protein n=1 Tax=Nannochloropsis ... [more]
A0A4D9CM67_9STRA1.320e-2962.00Ribosome biogenesis protein BOP1 homolog n=1 Tax=N... [more]
D0N0A8_PHYIT8.190e-2958.33Ribosome biogenesis protein BOP1 homolog n=4 Tax=P... [more]
A0A484DSD7_BRELC1.550e-2852.63Ribosome biogenesis protein BOP1 homolog n=1 Tax=B... [more]
A0A0P1AAJ0_PLAHL1.560e-2858.33Ribosome biogenesis protein BOP1 homolog n=1 Tax=P... [more]
A0A2D4BT84_PYTIN2.680e-2858.70Ribosome biogenesis protein BOP1 homolog n=2 Tax=P... [more]
A0A421FF26_9STRA2.890e-2858.33Ribosome biogenesis protein BOP1 homolog n=6 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012953BOP1, N-terminal domainPFAMPF08145BOP1NTcoord: 86..137
e-value: 1.2E-11
score: 45.1
IPR028598WD repeat BOP1/Erb1PANTHERPTHR17605RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEINcoord: 12..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18885contigH-paniculata_contig18885:352..4145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18885.4712.1mRNA_H-paniculata_contig18885.4712.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18885 352..4145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18885.4712.1 ID=prot_H-paniculata_contig18885.4712.1|Name=mRNA_H-paniculata_contig18885.4712.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
QSSDEEGDDSNEDGAGGGGGGTGKGRAKVDESTRKTWSLAARSKEIEAAK
RDGALAMSMAMHTDDLSSDDDEENRNTVGRVPLHWYDEYDHIGYDRNGGK
VMKRADGVGNGVDAALAARDDPNYARTVYDAYNDREVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012953BOP1_N_dom
IPR028598BOP1/Erb1