prot_H-paniculata_contig18833.4694.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 1.130e-13 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVL 48
+S GEDN IR+WDLRTRRCKVIFTGH+K +TCL+ L+++ S +VL
Sbjct: 2523 VSGGEDNQIRMWDLRTRRCKVIFTGHTKAITCLTALREDSSTLVL 2567
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.130e-13 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVL 48
+S GEDN IR+WDLRTRRCKVIFTGH+K +TCL+ L+++ S +VL
Sbjct: 2578 VSGGEDNQIRMWDLRTRRCKVIFTGHTKTITCLTALREDSSTLVL 2622
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: A0A6B2LG85_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG85_9EUKA) HSP 1 Score: 60.8 bits (146), Expect = 8.000e-10 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 1 MFFLSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLWD 60
++ +S G D TI+LW L + CK+ FTGH KP++C+ L D+ ++SG++D T+R+WD
Sbjct: 59 LWIVSAG-DLTIKLWSLESLECKLTFTGHKKPISCVKFLDDHS---IVSGSQDHTLRIWD 114
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: A0A8C5BZU6_GADMO (F-box and WD repeat domain containing 10 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5BZU6_GADMO) HSP 1 Score: 59.7 bits (143), Expect = 6.280e-9 Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLWD 60
+S G D TIR W ++T C ++ +GH+ VTCL D S+ ++SGAKDC V++WD
Sbjct: 290 ISAGYDLTIRCWSMKTSLCWMLLSGHTGTVTCL----DVHSDHLVSGAKDCRVKVWD 342
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: A0A8C4Z562_GADMO (F-box and WD repeat domain containing 10 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4Z562_GADMO) HSP 1 Score: 59.7 bits (143), Expect = 6.330e-9 Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLWD 60
+S G D TIR W ++T C ++ +GH+ VTCL D S+ ++SGAKDC V++WD
Sbjct: 467 ISAGYDLTIRCWSMKTSLCWMLLSGHTGTVTCL----DVHSDHLVSGAKDCRVKVWD 519
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: Q6CDT2_YARLI (YALI0B21406p n=4 Tax=Yarrowia TaxID=4951 RepID=Q6CDT2_YARLI) HSP 1 Score: 57.4 bits (137), Expect = 3.990e-8 Identity = 23/55 (41.82%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 7 GEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSN-VVLSGAKDCTVRLWD 60
G+D+ +R+W + T RC + G+ K V C+ +D R +V+SGA+D TVR+WD
Sbjct: 93 GKDSDVRVWKVETGRCVAVLKGNKKTVRCVRVARDGRGKLIVVSGARDNTVRVWD 147
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: W5N6G1_LEPOC (CMT1A duplicated region transcript 1 n=4 Tax=Lepisosteidae TaxID=7915 RepID=W5N6G1_LEPOC) HSP 1 Score: 55.8 bits (133), Expect = 1.450e-7 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 2 FFLSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLWD 60
F +S D +IR W+L+T C IF GH ++CL D N ++SGAKDC V++W+
Sbjct: 460 FVISASYDLSIRCWNLQTGACMKIFRGHLGTISCL----DLHGNRLVSGAKDCKVKVWN 514
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: UPI001BD2886F (LOW QUALITY PROTEIN: CMT1A duplicated region transcript 1 protein n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD2886F) HSP 1 Score: 53.9 bits (128), Expect = 6.910e-7 Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLW 59
+S D++IR W+L+T C +I GH++ V CL D + ++SGAKDC V++W
Sbjct: 398 ISASWDSSIRCWNLKTDTCLMILYGHTRAVNCL----DVHGDRLVSGAKDCLVKVW 449
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: UPI001B3B1873 (LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 10 n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3B1873) HSP 1 Score: 53.9 bits (128), Expect = 6.910e-7 Identity = 23/57 (40.35%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLWD 60
++ D +IR W+L+T RC+++ GH+ V CL ++ D+R ++SGAKDC V++W+
Sbjct: 393 ITASCDASIRCWNLKTDRCEMVLYGHTGTVNCL-DVHDDR---LVSGAKDCLVKVWN 445
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Match: A0A4W6E2N2_LATCA (F-box and WD repeat domain containing 10 n=4 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6E2N2_LATCA) HSP 1 Score: 53.5 bits (127), Expect = 9.420e-7 Identity = 22/57 (38.60%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 4 LSRGEDNTIRLWDLRTRRCKVIFTGHSKPVTCLSELKDNRSNVVLSGAKDCTVRLWD 60
++ D +IR W+L+T RC+++ GH+ V CL D ++ ++SGAKDC V++W+
Sbjct: 307 ITASCDASIRCWNLKTDRCEMVLYGHTGTVNCL----DVHADRLVSGAKDCIVKVWN 359 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18833.4694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig18833.4694.1 ID=prot_H-paniculata_contig18833.4694.1|Name=mRNA_H-paniculata_contig18833.4694.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bpback to top |