prot_H-paniculata_contig18448.4538.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18448.4538.1
Unique Nameprot_H-paniculata_contig18448.4538.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 4.530e-41
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 
Query:   10 YQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            ++VWLAGARMELAAGNC HAQRLLNRAFQEVPEKSKSHVFLEC XXXXXXXXXXXXXXXXXRAR ETKSEWKVFLESVLLEIRANDWQRAA EA  ALKVHSGAG
Sbjct:  561 WKVWLAGARMELAAGNCLHAQRLLNRAFQEVPEKSKSHVFLECXXXXXXXXXXXXXXXXXXRARVETKSEWKVFLESVLLEIRANDWQRAATEAQEALKVHSGAG 665
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.250e-26
Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 0 
Query:   10 YQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            ++VWLAGAR EL AG    A+ LL RAF+EVP+KSK+HVFLECA       XXXXXX    +AR E + EWKVFLESVLLE+RA +W RA  +A +AL VH+G G
Sbjct:  953 WKVWLAGARTELGAGRVDVARALLRRAFREVPDKSKAHVFLECARLEEYVGXXXXXXSVLAQARVEARGEWKVFLESVLLEMRAGEWVRAIDQARSALSVHTGTG 1057
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.460e-20
Identity = 68/105 (64.76%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:   10 YQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            ++VWLAGAR EL AG    A+ LL RAF EVP+KSK+H      XXXXXXXXXXXXXXXXX AR E + EWKVFLESVLLE+RA +W RA  +A +AL VH+G G
Sbjct: 1303 WKVWLAGARTELGAGRVDFARALLRRAFCEVPDKSKAHXXXXXXXXXXXXXXXXXXXXXXXXARVEARGEWKVFLESVLLEMRAGEWARAIDQARSALSVHTGTG 1407
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A7S0PWJ1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWJ1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.970e-20
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:    9 CYQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            C++VWLAG RMEL+AGN   A++L  RA   VPEK K+ V +ECA                 +AR E  S+WKV+LESVLLEIR+   +RA   A  AL++HSG G
Sbjct:  999 CWKVWLAGGRMELSAGNTEQARKLFLRAHNVVPEKGKAAVVMECARLEEFVGETEVARAVLRKARSEVGSDWKVWLESVLLEIRSGKQRRAIDVAKRALEMHSGTG 1104
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.350e-19
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 0 
Query:   10 YQVWLAGARMELAAGNCSH-----------AQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            ++VWLAG R ELA  +  +           AQ+LLNRA  +VP+KS++ V LEC+                 +AR ETK EWKVFLESV+LE+R  +   A +EA +AL++HSG G
Sbjct:  712 WKVWLAGVRTELANADSKNKLTVDNAGVQKAQKLLNRALMDVPDKSRAQVLLECSRVEEYIGKIDKAREILAKARKETKHEWKVFLESVMLEVRCGNRDGALKEAKSALEIHSGTG 827
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A7S4F2X1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2X1_CHRCT)

HSP 1 Score: 86.7 bits (213), Expect = 1.840e-17
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0 
Query:   10 YQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            ++VWL GAR EL     + +Q LL +A++E P K+++ V LE +                  AR   + EWKVFLESVLLE+R+ D QRA +EAH ALKVH G G
Sbjct: 1153 WKVWLGGARTELCHSQFAVSQALLEQAYKESPPKTRAIVMLEQSRLHELCGNAEQSRKLLRGARKTNRQEWKVFLESVLLELRSQDMQRALKEAHQALKVHRGTG 1257
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A7S1VNZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNZ6_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.520e-17
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 0 
Query:    9 CYQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            C++V LAG RMELAAGN   A++L +RA + VPEK K    LEC+                 ++R E  S+WKV+LESVL+E+R  +  RA   A  AL++H+G G
Sbjct:  376 CWKVLLAGGRMELAAGNFEKARKLFHRAHRSVPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTG 481
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A7S1YIW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIW7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.690e-17
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 0 
Query:    9 CYQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            C++V LAG RMELAAGN   A++L +RA + VPEK K    LEC+                 ++R E  S+WKV+LESVL+E+R  +  RA   A  AL++H+G G
Sbjct: 1236 CWKVLLAGGRMELAAGNFEKARKLFHRAHRSVPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTG 1341
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A7S4MSC1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSC1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.060e-16
Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 0 
Query:    9 CYQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            C++VWLAG RMEL AG    A++L  R+   VPEK ++ V LECA                 +AR    S+WKV+LES+ LE+R     RA R A  AL VHSG G
Sbjct:   81 CWKVWLAGGRMELMAGRTDEARQLFLRSHDVVPEKGRAAVMLECARLEEFAGDIELARAILSKARFNAGSDWKVWLESIFLEMRCGMRGRAIRLAQNALDVHSGTG 186
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BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.190e-16
Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 0 
Query:    9 CYQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFLECAXXXXXXXXXXXXXXXXXRARGETKSEWKVFLESVLLEIRANDWQRAAREAHAALKVHSGAG 114
            C++VWLAG RMEL AG    A++L  R+   VPEK ++ V LECA                 +AR    S+WKV+LES+ LE+R     RA R A  AL VHSG G
Sbjct: 1320 CWKVWLAGGRMELMAGRTDEARQLFLRSHDVVPEKGRAAVMLECARLEEFAGDIELARAILSKARFNAGSDWKVWLESIFLEMRCGMRGRAIRLAQNALDVHSGTG 1425
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18448.4538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI4.530e-4192.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TFT0_9STRA4.250e-2660.00Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9D155_9STRA1.460e-2064.76Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0PWJ1_9STRA1.970e-2048.11Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A6S8EA78_9STRA4.350e-1943.10Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S4F2X1_CHRCT1.840e-1744.76Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1VNZ6_9STRA4.520e-1743.40Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1YIW7_9STRA4.690e-1743.40Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4MSC1_9STRA1.060e-1644.34Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4ITD3_9STRA1.190e-1644.34Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..111
e-value: 1.9E-13
score: 52.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..100
NoneNo IPR availablePANTHERPTHR11246:SF20TPR-CONTAINING PROTEIN DDB_G0280363coord: 9..114
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 9..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18448contigH-paniculata_contig18448:3310..4990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18448.4538.1mRNA_H-paniculata_contig18448.4538.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18448 3310..4990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18448.4538.1 ID=prot_H-paniculata_contig18448.4538.1|Name=mRNA_H-paniculata_contig18448.4538.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MCSALVVDCYQVWLAGARMELAAGNCSHAQRLLNRAFQEVPEKSKSHVFL
ECARLEEFTGNLECARQILGRARGETKSEWKVFLESVLLEIRANDWQRAA
REAHAALKVHSGAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf