prot_H-paniculata_contig1815.4405.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1815.4405.1
Unique Nameprot_H-paniculata_contig1815.4405.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length595
Homology
BLAST of mRNA_H-paniculata_contig1815.4405.1 vs. uniprot
Match: A0A6H5JVR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR9_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 4.810e-116
Identity = 256/580 (44.14%), Postives = 324/580 (55.86%), Query Frame = 0
Query:   38 DTMRTVGDDVLAMVATYCDCKILCRLGAVSRRFRHIPYNDMLWKLRALDIMP-LAQVEAAKVALGFACYRHLIETLTRIGIPHGVLGFWRGDGRSTTADKTPLE--GLESTVGETSEGADGTDGRGELLRICFSSGGLLGESISPAGTSQAVFTIRISMVGQS-VKIGYFSLEDPNASPANLGGDG-GWIPGQTIPEAFLASAVPLPTPTERAPPVRISGENGFFLERYDGRKSRFTYLVPPPATAAVVDDHGHQYSAAEMATLDLCGLWCAPYGSHGLEIIQLSMDYPKSLASSKVAAVPAAVGPNLSSREEQSATAAAVMAGAQARRTMEEEPEPAGAR------FECTASHKTASSSSSVCTSAPADDGSVDDLVXXXXXXXXXXXXXXXXXXXXXXXXAAESQQGSDTAFGDKE-----ARERCNS-----NLNVRSEESEGKYNYPC-LCGIKVTGDANVPTGELSFVI-MGNSCDVEEKVEADRRPVVLFTSNGAVMANLSNRRSWITSWRKGRGQINRTPGQWSPEWVDVDFITYQPGGRCAFSVVFRQLSEAVRVILDFERVLGTREAWPEW 594
            D  R + DD + +VA++  C  LC L  V RRF  +P+ D LW+LRALDI+P + QV +A   L    +R L+E  T IGIP GVLGFW+ +  +   D    +  GL+ T  +  E       RGELLRI   +GG L ESI+P+GT + +FTIR+S      +KIG+F LE  +A    +GGD   W+PG ++ EA       +P  T R P +R SG   FFLER DGR  R+  L  PPA++           AA  A  +LCGLWCAPYGSHGLEIIQLS D                  P+ S  EE   TAAA +  A   +        AG R         +++ +    S SVCTS PA D    +         XXXXXXXXXXXXXXXXX +    G   +  D       AR + NS          S    G  + P  L G KVTGD NVP G+ SFVI +    DV+E++ +D RPVV F   GAVMANL+NRR  I+ WRKGRGQINR PG+WSPEWVDV+F+ Y+ G RCAFSV+FRQ ++AVRV++DFER LG  E WP+W
Sbjct:   55 DKTRLLDDDTINVVASFASCHDLCVLAEVCRRFSPLPFCDDLWELRALDILPSVPQVHSAMSQLKLTSFRQLVEAFTLIGIPGGVLGFWQAEAPTLAWDVQQQQQGGLDGTTVQQPEA------RGELLRITLEAGGFLCESIAPSGTRRRIFTIRVSKTPTGRIKIGFFCLEKESA--LTIGGDNDSWVPGDSMAEALARYTFAIPGSTRRTP-IRASGTKAFFLERNDGRTCRYVKLTAPPASSPG--------GAAAGAVKNLCGLWCAPYGSHGLEIIQLSTD------------------PSCSPNEE---TAAAAVKAATVVKLSSLSQSWAGGRGGRRGSVSGSSTSRVTDGSESVCTSTPATDADGSEADSCDEAGGXXXXXXXXXXXXXXXXXXSSDGHGDIESVLDDGCLASIARRKGNSLHHADTATAGSGAGAGDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQW 596          
BLAST of mRNA_H-paniculata_contig1815.4405.1 vs. uniprot
Match: D7FWS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS5_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.120e-94
Identity = 222/512 (43.36%), Postives = 279/512 (54.49%), Query Frame = 0
Query:  100 LGFACYRHLIETLTRIGIPHGVLGFWRGDGRSTTADKTPLE--GLESTVGETSEGADGTDGRGELLRICFSSGGLLGESISPAGTSQAVFTIRISMVGQS-VKIGYFSLEDPNASPANLGGDG-GWIPGQTIPEAFLASAVPLPTPTERAPPVRISGENGFFLERYDGRKSRFTYLVPPPATAAVVDDHGHQYSAAEMATLDLCGLWCAPYGSHGLEIIQLSMDYPKSLASSKVAAVPAAVGPNLSSREEQSATAAAVMAGAQARRTMEEEPEPAGARFECTASHKTASSSSSVCTSAPADD------GSVDDLVXXXXXXXXXXXXXXXXXXXXXXXXAAESQQGSDTAFGDKEARERCNS-----NLNVRSEESEGKYNYPC-LCGIKVTGDANVPTGELSFVI-MGNSCDVEEKVEADRRPVVLFTSNGAVMANLSNRRSWITSWRKGRGQINRTPGQWSPEWVDVDFITYQPGGRCAFSVVFRQLSEAVRVILDFERVLGTREAWPEW 594
            L    +R L+E  T IGIP GVLGFW+ +  + + D    +  GL+    +  E       RGELLRI   +GG L ESI+P GT + +FTIR+S      + IG+F LE    S   +GGD   W+PG ++ EA       +P  T+R P +R SG   FFLER DGR  R+  L  PPA++  V        AA  A  +LCGLWCAPYGSHGLEIIQLS D P      + AA         ++  + S+ + +   G            P G+   C+ S  T   S SVCTS PA D      GS D+      XXXXXXXXXXXXX               D       AR + NS          S    G  + P  L G KVTGD NVP G+ SFVI +    DV+E++ +D RPVV F   GAVMANL+NRR  I+ WR GRGQINR PG+WSPEWVDV+F+ Y+ G RCAFSV+FRQ ++AVRV++DFER LG  E WP+W
Sbjct:    4 LKLTSFRQLVEAFTLIGIPGGVLGFWQAEAPTLSWDVQQQQQGGLDGATVQEREA------RGELLRITLEAGGFLCESIAPNGTRRRIFTIRVSKTPTDRINIGFFCLE--KESSLTIGGDDDSWVPGDSMAEALARYTFAVPGSTKRTP-MRASGTKAFFLERNDGRTCRYVKLTAPPASSPGV-------VAAAGAVKNLCGLWCAPYGSHGLEIIQLSTD-PSCSPDEETAAAXXXXXXKAATVAKLSSLSQSWAGGRGG---------PRGSVSGCSTSRMT-DGSESVCTSTPATDADGSEAGSCDEAGGSSEXXXXXXXXXXXXXSSDGDGDGDVESVLDDVCLASI-ARRKGNSLHHADTGTAGSGAGAGDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRNGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQW 487          
BLAST of mRNA_H-paniculata_contig1815.4405.1 vs. uniprot
Match: A0A7S2F4S0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4S0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.390e-24
Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 0
Query:  466 YPCLCGIKVTGDANVPTGELSFVI-MGNSCDVEEKVEADRRPVVLFTSNGAVMANLSNRRSWITSWRKGRGQINRTPGQWSPEWVDVDFITYQPGGRCAFSVVFRQLSEAVRVILDFERV 584
            YP L G+KV GDANVPT +LSFV+ + +  D+  ++ +D R VV F  +G V+ +L+ R   I +W +G GQINR  G+W+PEWV +DFI Y    + A+S+V+ +  E +R ++DF RV
Sbjct:  197 YPRLEGMKVIGDANVPTSKLSFVVDLSDPSDISTRLASDTRQVVSFPPDGFVIMDLNRRERDIVAWYRGAGQINRQKGKWAPEWVGLDFIVYNKNSKAAYSLVWDEDDEELRHMIDFTRV 316          
BLAST of mRNA_H-paniculata_contig1815.4405.1 vs. uniprot
Match: A0A061QLQ6_9CHLO (Uncharacterized protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QLQ6_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 1.380e-19
Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 0
Query:  469 LCGIKVTGDANVPTGELSFVIMGNSCDVEEKVEADRRPVVLFTSNGAVMANLSNRRSWITSWRKGRGQINRTPGQWSPEWVDVDFITYQPGGRCAFSVVFRQLSEAVRVILDFERVLGTREAW 591
            L G+K+TGD NVP  +LSFV      D  E V AD RP++ F S G  + NL +R   +     G+GQINR P  W+PEWVDV  ITY  G R  FS+++  + E  R I+DF   L + +AW
Sbjct:   86 LVGLKLTGDPNVPATKLSFVAALTEPDDPEGVLADLRPIIAFPSTGPAVVNLQDRE--VAGLFLGKGQINRDPDVWAPEWVDVRLITYS-GQRKGFSILWHDMGEFWRHIIDFAP-LESPDAW 204          
BLAST of mRNA_H-paniculata_contig1815.4405.1 vs. uniprot
Match: A0A8J9WRD6_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRD6_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 1.950e-10
Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 0
Query:  464 YNYPCLCGIKVTGDANVPTGELSFV------IMGNSCDVEEKVEAD------RRPVVLFTSNGAVMANLSNRRSWITSWRKGRGQINRTPGQWSPEWVDVDFITYQPGGRCAFSVVFRQLSEAVRVILDF 581
            + Y  L G+K+TGD NVP G L+F       I+G     EE+   D       RP+V+  +   V+ +L  R   + +   GRGQIN  P +WSPEW +V  + Y  G +  FS+++  L    R ++DF
Sbjct:  295 FAYGKLEGLKITGDPNVPAGNLTFEVWSQYPIVGRYDGFEEEELFDGQIMEINRPIVMHVAGQRVLVDLDERP--VAARYFGRGQINADPSRWSPEWEEVQLLVYD-GDQPVFSILWSDLGSPYRHMMDF 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1815.4405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JVR9_9PHAE4.810e-11644.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS5_ECTSI1.120e-9443.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2F4S0_9STRA3.390e-2445.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A061QLQ6_9CHLO1.380e-1944.72Uncharacterized protein n=2 Tax=Tetraselmis sp. GS... [more]
A0A8J9WRD6_9CHLO1.950e-1034.62Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021894Domain of unknown function DUF3506PFAMPF12014DUF3506coord: 410..528
e-value: 3.8E-7
score: 30.2
NoneNo IPR availablePANTHERPTHR10706F-BOX FAMILY PROTEINcoord: 297..488
IPR026941F-box only protein 31PANTHERPTHR10706:SF130F-BOX ONLY PROTEIN 31coord: 297..488
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 34..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1815contigH-paniculata_contig1815:3117..6389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1815.4405.1mRNA_H-paniculata_contig1815.4405.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1815 1647..7972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1815.4405.1 ID=prot_H-paniculata_contig1815.4405.1|Name=mRNA_H-paniculata_contig1815.4405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=595bp
MRPVKYQRGPAGKSIQSPSRFIFDVATTAATAGSPKADTMRTVGDDVLAM
VATYCDCKILCRLGAVSRRFRHIPYNDMLWKLRALDIMPLAQVEAAKVAL
GFACYRHLIETLTRIGIPHGVLGFWRGDGRSTTADKTPLEGLESTVGETS
EGADGTDGRGELLRICFSSGGLLGESISPAGTSQAVFTIRISMVGQSVKI
GYFSLEDPNASPANLGGDGGWIPGQTIPEAFLASAVPLPTPTERAPPVRI
SGENGFFLERYDGRKSRFTYLVPPPATAAVVDDHGHQYSAAEMATLDLCG
LWCAPYGSHGLEIIQLSMDYPKSLASSKVAAVPAAVGPNLSSREEQSATA
AAVMAGAQARRTMEEEPEPAGARFECTASHKTASSSSSVCTSAPADDGSV
DDLVSVDDTIHIEDFVEFHDQSDNRDESAAESQQGSDTAFGDKEARERCN
SNLNVRSEESEGKYNYPCLCGIKVTGDANVPTGELSFVIMGNSCDVEEKV
EADRRPVVLFTSNGAVMANLSNRRSWITSWRKGRGQINRTPGQWSPEWVD
VDFITYQPGGRCAFSVVFRQLSEAVRVILDFERVLGTREAWPEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021894DUF3506
IPR026941FBXO31
IPR036047F-box-like_dom_sf