prot_H-paniculata_contig1805.4357.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1805.4357.1
Unique Nameprot_H-paniculata_contig1805.4357.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length356
Homology
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BLAST of mRNA_H-paniculata_contig1805.4357.1 vs. uniprot
Match: D8LQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ19_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.750e-18
Identity = 98/278 (35.25%), Postives = 127/278 (45.68%), Query Frame = 0 
Query:   71 RFVPGDPFANEEADIGAWADHFTYLSVVPAASWTPTMTTEPTTTGTAAVGTVSLVEHGRNNEGPRWQDECCDAPPIGGVSSCSPGSASGNSAYCVLPQGASVARGDGGNVIGNVLVAGEVVGGGDDPVVVGRAVRRGHENEEEQIGELEAEGVLASHGVYEEYLAYDCRPP------SPS-TSENNGDENNAVQSNISGAGGNEGAGGLLLTANAKTKRS---QNYDQSADTNLVDPEEREEVRKQSLLFSPQQREVREEMMDRLFHEIWRRITPDLL 338
            R+VPGDPFANEEAD+GAWA HFTYLSVVP          E  +   A  G   L+E G   E P  +D        GGV++       G+    + P+ A+                           + GR +    + EE          V ASHGVYEEYLAYDCRPP      SP   +   G+E+  + +  SGA       G++  AN+   +     N   S    L         R  + L +PQ RE+R+E+MDRLF E+W RITPDLL
Sbjct:  113 RYVPGDPFANEEADVGAWAKHFTYLSVVPTERGEGG-DAEKRSNDNAGGG---LLERGPVAEPPPVRDVMETDEETGGVAAVE-----GSRIQDLTPEEAAAE-------------------------LAGRRLEEMPQGEE----------VFASHGVYEEYLAYDCRPPGFDDVTSPGGETMGPGEEDPRLAAKGSGAWA---VTGVVPNANSAVGQGAWVSNNAASEPPALGASTTGGSHRVVARLDTPQ-RELRQEIMDRLFDELWERITPDLL 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1805.4357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ19_ECTSI1.750e-1835.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1805contigH-paniculata_contig1805:18005..21584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1805.4357.1mRNA_H-paniculata_contig1805.4357.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1805 17936..21796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1805.4357.1 ID=prot_H-paniculata_contig1805.4357.1|Name=mRNA_H-paniculata_contig1805.4357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=356bp
MALVESDLLLCKADDSNTERQDNPEDDSSTTTNDKYRDKDNNCDSSPNAM
VMPRHRHDQQQNQEQRQQQRRFVPGDPFANEEADIGAWADHFTYLSVVPA
ASWTPTMTTEPTTTGTAAVGTVSLVEHGRNNEGPRWQDECCDAPPIGGVS
SCSPGSASGNSAYCVLPQGASVARGDGGNVIGNVLVAGEVVGGGDDPVVV
GRAVRRGHENEEEQIGELEAEGVLASHGVYEEYLAYDCRPPSPSTSENNG
DENNAVQSNISGAGGNEGAGGLLLTANAKTKRSQNYDQSADTNLVDPEER
EEVRKQSLLFSPQQREVREEMMDRLFHEIWRRITPDLLAAAENSNSSNAR
VVKTG*
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