prot_H-paniculata_contig1801.4347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1801.4347.1
Unique Nameprot_H-paniculata_contig1801.4347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length142
Homology
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BLAST of mRNA_H-paniculata_contig1801.4347.1 vs. uniprot
Match: A0A6H5KJJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ2_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.690e-63
Identity = 94/126 (74.60%), Postives = 106/126 (84.13%), Query Frame = 0 
Query:   18 MWAEVIKKENAAIGIPHRFFLNPNKLVFIARKPTEVDPRTYEADSLLVGEQAAV--PPIQAVAKEGKHDGMGELDANIAQLWKTEAQQWGSFYSQKRPPGADPFSSQRSCWQKPRSKCDVTEYGDR 141
            MWAEVIKKENA IG+PHRFFLNPNKLVFIARKPTEVDPRTYEADSL  G Q ++  P    +A+EG       LDA+ A+LWKTE+Q+WGSFY++KRPPG DPFSSQRSCW+KPRSKCDVTEYGDR
Sbjct:    1 MWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQGSLESPSRIRLAEEGDKSDEATLDASSAKLWKTESQRWGSFYAKKRPPGVDPFSSQRSCWRKPRSKCDVTEYGDR 126
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BLAST of mRNA_H-paniculata_contig1801.4347.1 vs. uniprot
Match: D8LK45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK45_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 5.460e-34
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0 
Query:    3 ARDGTKVVDEVARQAMWAEVIKKENAAIGIPHRFFLNPNKLVFIARKPTEVDPRTYEADSLLVGEQ 68
            A+DG KVVDEV+RQAMWAEVIKKENA IG+PHRFFLNPNKLVFIARKPTEVDPRTYEADSL  G Q
Sbjct:    2 AKDGAKVVDEVSRQAMWAEVIKKENATIGVPHRFFLNPNKLVFIARKPTEVDPRTYEADSLSTGHQ 67
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BLAST of mRNA_H-paniculata_contig1801.4347.1 vs. uniprot
Match: A0A835Z8L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L4_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.020e-16
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:    8 KVVDEVARQAMWAEVIKKENAAIGIPHRFFLNPNKLVFIARKPTEVDPRTYEADS 62
            + VDEVAR  MW EVI KENA IG PH FFL+P+KL F+ RKPTEVDPR   A++
Sbjct:    1 QAVDEVARNKMWVEVINKENAVIGRPHTFFLDPSKLCFLPRKPTEVDPRALAAEA 55
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1801.4347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJJ2_9PHAE1.690e-6374.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK45_ECTSI5.460e-3487.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8L4_9STRA1.020e-1665.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029214FAM183 familyPFAMPF14886FAM183coord: 18..138
e-value: 1.3E-7
score: 32.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1801contigH-paniculata_contig1801:325..1534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1801.4347.1mRNA_H-paniculata_contig1801.4347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1801 325..1534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1801.4347.1 ID=prot_H-paniculata_contig1801.4347.1|Name=mRNA_H-paniculata_contig1801.4347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MTARDGTKVVDEVARQAMWAEVIKKENAAIGIPHRFFLNPNKLVFIARKP
TEVDPRTYEADSLLVGEQAAVPPIQAVAKEGKHDGMGELDANIAQLWKTE
AQQWGSFYSQKRPPGADPFSSQRSCWQKPRSKCDVTEYGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029214FAM183