prot_H-paniculata_contig17846.4271.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17846.4271.1
Unique Nameprot_H-paniculata_contig17846.4271.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A1Y1LDU4_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LDU4_PHOPY)

HSP 1 Score: 58.5 bits (140), Expect = 1.140e-8
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPF 50
            M+  T TRPDIAYAV  AAR+M++  QED+N  KRIFRYL      G+ +
Sbjct: 1126 MHLMTATRPDIAYAVSFAARKMQEPTQEDWNRVKRIFRYLRGTSSYGLHY 1175          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A1Y1LVN7_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LVN7_PHOPY)

HSP 1 Score: 53.5 bits (127), Expect = 6.660e-7
Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGI 48
            +Y STG+RPDIAYAV  AA  +E+ C+  +   KRI RYL    ++G+
Sbjct:  516 LYLSTGSRPDIAYAVSTAAEAVENPCEGHWTAVKRILRYLKGTMEMGL 563          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A838N7N4_9ARCH (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Nitrosopumilus sp. TaxID=2024843 RepID=A0A838N7N4_9ARCH)

HSP 1 Score: 52.8 bits (125), Expect = 1.240e-6
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPF 50
            +Y S  TRPDI+YAV+QAA+ M+ S + D+   KRIFRYL     L + +
Sbjct:  195 IYLSIATRPDISYAVNQAAQAMQSSTEYDWQKVKRIFRYLKGTKTLKLKY 244          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A225UGA2_9STRA (Copia type Polyprotein n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGA2_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 2.100e-6
Identity = 22/52 (42.31%), Postives = 30/52 (57.69%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPFDG 52
            MY +T TRPDIAYAV Q +R ++   Q+     KR+ RYL     +GI +  
Sbjct:    1 MYLATCTRPDIAYAVGQLSRYVQQPTQQHIGAAKRVLRYLVGTKGMGIEYSA 52          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: F0WEI4_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEI4_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.340e-6
Identity = 21/52 (40.38%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPFDG 52
            +Y +TGTRPDIA+AV Q +R +E   ++ +N   R+ RYL +    GI ++ 
Sbjct:  306 LYVATGTRPDIAFAVCQLSRHLEQPSEQHWNAAIRVLRYLKSTATKGICYEA 357          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: UPI0009F67B41 (uncharacterized protein LOC110106054 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F67B41)

HSP 1 Score: 50.1 bits (118), Expect = 9.840e-6
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 0
Query:    7 TRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPFD 51
            TRPDIA+  +   +RM     +DF T KR+ RY+    DLGIP D
Sbjct:  178 TRPDIAFTTNYICQRMHKPSVDDFQTLKRLLRYVQGTTDLGIPID 222          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: F0WYI3_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WYI3_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.120e-5
Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGI 48
            +Y +TGTRPDIA+AV Q +R +E   ++ +N   R+ RYL +    GI
Sbjct:  471 LYVATGTRPDIAFAVCQLSRHLEQPSEQHWNAAIRVLRYLKSTATRGI 518          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A2I0WVM1_9ASPA (Putative mitochondrial protein n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WVM1_9ASPA)

HSP 1 Score: 49.7 bits (117), Expect = 1.260e-5
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 0
Query:    7 TRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPFD 51
            TRPDIA+  +   +RM     +DF T KR+ RY+    DLGIP D
Sbjct:   34 TRPDIAFTTNYICQRMHKPYVDDFQTLKRLLRYVQGTTDLGIPID 78          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A284QR55_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284QR55_ARMOS)

HSP 1 Score: 48.9 bits (115), Expect = 2.850e-5
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPF 50
            MYA+ G+RPDIA+AV + ++ +++   E     KR+FRYL    D GI +
Sbjct:  286 MYAANGSRPDIAHAVTELSKYVQNPAAEHVTALKRVFRYLKGTLDSGITY 335          
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Match: A0A0G4IXE9_PLABS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IXE9_PLABS)

HSP 1 Score: 48.9 bits (115), Expect = 2.860e-5
Identity = 21/46 (45.65%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    7 TRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPFDG 52
            TRPDIAYAV++ +R ++D     F   KR+FRYL+   + G+ F+G
Sbjct:  325 TRPDIAYAVNEVSRYVQDPGPAHFVALKRVFRYLNGTRNYGLLFEG 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17846.4271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A1Y1LDU4_PHOPY1.140e-854.00Uncharacterized protein (Fragment) n=1 Tax=Photinu... [more]
A0A1Y1LVN7_PHOPY6.660e-747.92Integrase catalytic domain-containing protein (Fra... [more]
A0A838N7N4_9ARCH1.240e-648.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A225UGA2_9STRA2.100e-642.31Copia type Polyprotein n=2 Tax=Phytophthora megaka... [more]
F0WEI4_9STRA4.340e-640.38Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
UPI0009F67B419.840e-646.67uncharacterized protein LOC110106054 n=1 Tax=Dendr... [more]
F0WYI3_9STRA1.120e-543.75Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
A0A2I0WVM1_9ASPA1.260e-546.67Putative mitochondrial protein n=2 Tax=Dendrobium ... [more]
A0A284QR55_ARMOS2.850e-542.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0G4IXE9_PLABS2.860e-545.65Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17846contigH-paniculata_contig17846:4313..4468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17846.4271.1mRNA_H-paniculata_contig17846.4271.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17846 3962..4468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17846.4271.1 ID=prot_H-paniculata_contig17846.4271.1|Name=mRNA_H-paniculata_contig17846.4271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
MYASTGTRPDIAYAVHQAARRMEDSCQEDFNTCKRIFRYLSTVPDLGIPF
DG
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