prot_H-paniculata_contig1770.4222.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1770.4222.1
Unique Nameprot_H-paniculata_contig1770.4222.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
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BLAST of mRNA_H-paniculata_contig1770.4222.1 vs. uniprot
Match: A0A6H5JDT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT1_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.630e-19
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0 
Query:   14 VISPLSPGNR-RRHRPAWVFDTSAASSRREAQAFDVLEQARQVEMFIVRGQRKYEILAPRWRGMTGKRLLKLEYGERLGRAKRGRSRQ 100
              S  +PG R R+  P WVFDTS A S+ EA+A  VLE+ARQVE FI+ G  K +ILAPRWR MTGKRLL+LE+G+R+G A + + R+
Sbjct:  434 AASAGTPGVRARKPCPRWVFDTSTAISKSEAKAHGVLEEARQVEAFIINGGEKQKILAPRWRSMTGKRLLRLEHGQRMGLAAKVKGRR 521
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1770.4222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDT1_9PHAE2.630e-1956.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1770contigH-paniculata_contig1770:1796..2981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1770.4222.1mRNA_H-paniculata_contig1770.4222.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1770 1796..2983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1770.4222.1 ID=prot_H-paniculata_contig1770.4222.1|Name=mRNA_H-paniculata_contig1770.4222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
EVSGGGDNESGVSVISPLSPGNRRRHRPAWVFDTSAASSRREAQAFDVLE
QARQVEMFIVRGQRKYEILAPRWRGMTGKRLLKLEYGERLGRAKRGRSRQ
GSPGGADKLEGTGRSTGARVETREAPLS
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