prot_H-paniculata_contig1759.4184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1759.4184.1
Unique Nameprot_H-paniculata_contig1759.4184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: D8LGF1_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF1_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 2.520e-42
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    3 GATHMQQLQMQQAQIQREQAKLNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            GAT MQQLQ+QQA IQREQA++N+FW  V  +M +IDPE EDFK HELPLARIKKIMRLEDD+AE GAPRFMIAAEAPI+IAKACEIFVLE
Sbjct:    6 GATPMQQLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLE 96          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A6H5KYW5_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.000e-41
Identity = 73/91 (80.22%), Postives = 82/91 (90.11%), Query Frame = 0
Query:    3 GATHMQQLQMQQAQIQREQAKLNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            GAT MQQLQ+QQAQIQREQA++N+FW  V  +M +IDPE EDFK HELPLARIKKIMRLEDD+AE GAPRFMIAAEAPI+IAKACEIF+LE
Sbjct:    6 GATPMQQLQLQQAQIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFILE 96          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A8K1CIA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIA2_PYTOL)

HSP 1 Score: 94.0 bits (232), Expect = 3.040e-21
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 0
Query:    9 QLQMQQAQIQREQAKLNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLEV 94
            QLQ Q+AQ+Q +  +L  FW N +Q++ ++DP T DFKTH+LPLARIKKIM+ +DDV        MI+AEAP++ AKACE+F+LE+
Sbjct:   55 QLQSQRAQMQHQMNQLAAFWQNQVQEISQVDPNTFDFKTHQLPLARIKKIMKTDDDVR-------MISAEAPVLFAKACEMFILEI 133          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A2D4BX92_PYTIN (Nuclear transcription factor Y subunit C-4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX92_PYTIN)

HSP 1 Score: 90.5 bits (223), Expect = 2.990e-20
Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    9 QLQMQQAQIQREQAKLNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            QLQ Q+AQ+Q +  +L  FW + +Q++ +IDP T DFKTH+LPLARIKKIM+ +DDV        MI+AEAP++ AKACE+F+LE
Sbjct:   16 QLQSQRAQMQHQINQLAAFWQSQVQEISQIDPNTFDFKTHQLPLARIKKIMKTDDDVR-------MISAEAPVLFAKACEMFILE 93          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A7S3YAQ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAQ4_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 1.740e-18
Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   20 EQAKLNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDV-AELGAPRFMIAAEAPIVIAKACEIFVLE 93
            ++ +L +FW + + ++  IDPE EDFKT ELPLARIKKIMRLE++V +ELG  RFMI+AEAP+++AKA  +F  E
Sbjct:   37 QEVRLQQFWNDHLVEIGGIDPEKEDFKTLELPLARIKKIMRLEEEVQSELGGFRFMISAEAPVLLAKAAALFTGE 111          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A662XQJ6_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQJ6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.420e-17
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   24 LNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            L+ FW N IQ++ +IDP   DFKTH+LPLARIKKIM+ ++DV        MI+AEAP++ AKACE+F+LE
Sbjct:   32 LHAFWQNQIQEISQIDPNAFDFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILE 94          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A0W8CS98_PHYNI (Nuclear transcription factor Y subunit C-4 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CS98_PHYNI)

HSP 1 Score: 80.9 bits (198), Expect = 3.120e-17
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   24 LNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            L+ FW + IQD+ +IDP   DFKTH+LPLARIKKIM+ ++DV        MI+AEAP++ AKACE+F+LE
Sbjct:   34 LHAFWQHQIQDISQIDPNAFDFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILE 96          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A7S2CAV2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAV2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 9.800e-17
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   27 FWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVA-ELGAPRFMIAAEAPIVIAKACEIFVLE 93
            FW + +Q+++ IDP+ +D+   ELPLARIKKIM+ ED+V  ELG  RFMI+AEAP++ AKACEIF LE
Sbjct:   37 FWQSRMQEINMIDPDQKDWSQPELPLARIKKIMKSEDEVKLELGGQRFMISAEAPVMFAKACEIFALE 104          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: A0A8J5J0U7_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J0U7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.950e-17
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   24 LNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            L+ FW + IQD+ +IDP   DFKTH+LPLARIKKIM+ ++DV        MI+AEAP++ AKACE+F+LE
Sbjct:   34 LHAFWQHQIQDISQIDPNAFDFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILE 96          
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Match: T0Q5X3_SAPDV (CBFD_NFYB_HMF domain-containing protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q5X3_SAPDV)

HSP 1 Score: 80.9 bits (198), Expect = 1.300e-16
Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 0
Query:   24 LNEFWGNVIQDMHEIDPETEDFKTHELPLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLE 93
            L+ FW + I ++ +IDPE +DFKTH+LPLARIKKIM+ ++DV        MI+AEAP++ AKACE+F+LE
Sbjct:   33 LHAFWQSQIHEISQIDPEVQDFKTHQLPLARIKKIMKSDEDVR-------MISAEAPVLFAKACEMFILE 95          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1759.4184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGF1_ECTSI2.520e-4280.22CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KYW5_9PHAE2.000e-4180.22CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A8K1CIA2_PYTOL3.040e-2154.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BX92_PYTIN2.990e-2055.29Nuclear transcription factor Y subunit C-4 n=1 Tax... [more]
A0A7S3YAQ4_HETAK1.740e-1857.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662XQJ6_9STRA2.420e-1757.14CBFD_NFYB_HMF domain-containing protein n=1 Tax=No... [more]
A0A0W8CS98_PHYNI3.120e-1757.14Nuclear transcription factor Y subunit C-4 n=1 Tax... [more]
A0A7S2CAV2_9STRA9.800e-1760.29Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J5J0U7_9STRA9.950e-1757.14CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ph... [more]
T0Q5X3_SAPDV1.300e-1655.71CBFD_NFYB_HMF domain-containing protein n=7 Tax=Sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 49..94
e-value: 3.0E-8
score: 33.8
IPR009072Histone-foldGENE3D1.10.20.10coord: 6..96
e-value: 4.9E-20
score: 73.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 23..94
NoneNo IPR availablePANTHERPTHR10252:SF88NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-10-RELATEDcoord: 6..94
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 6..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1759contigH-paniculata_contig1759:14555..18895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1759.4184.1mRNA_H-paniculata_contig1759.4184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1759 14475..19103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1759.4184.1 ID=prot_H-paniculata_contig1759.4184.1|Name=mRNA_H-paniculata_contig1759.4184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MEGATHMQQLQMQQAQIQREQAKLNEFWGNVIQDMHEIDPETEDFKTHEL
PLARIKKIMRLEDDVAELGAPRFMIAAEAPIVIAKACEIFVLEVFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold