prot_H-paniculata_contig175.4142.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig175.4142.1
Unique Nameprot_H-paniculata_contig175.4142.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.470e-43
Identity = 82/175 (46.86%), Postives = 111/175 (63.43%), Query Frame = 0
Query:    1 MSYGMPENSCYDKRECKLRLRGNWEGRPGT-SLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWSTTTVADPKKGKVKPLVRGTVSMRVKQVWDQM-----RKCFKICGLTLNLSGNEDHERREHTFREDDPTILTEQQA 169
            MS+G+ E S  D+REC   + G+W+ RP   S+   +  +LVLDD KCH    F  +LK++A+   I +PGGLT + QP D MLN +MKR + G+YTA+ST+ VAD + GK+KP  RG VS   K+ W+ +     + CFKICGLTL L G+EDH   +H F ED   +L EQ A
Sbjct:   98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHA 272          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A6H5JE48_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE48_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.660e-31
Identity = 68/159 (42.77%), Postives = 93/159 (58.49%), Query Frame = 0
Query:   14 RECKLRLRGNWEGRPGT-SLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWSTTTVADPKKGKVKPLVRGTVSMRVKQVW-----DQMRKCFKICGLTLNLSGNEDHERREHTFREDDPTILTE 166
            REC L L   W   P   S+   + S+LVLDD++ H    F E L++  +   IL+PGGLT + QP D MLN E+KR + GR T +  + +ADPK GK++P  RG VS R K+ W     + ++KCFK+CGLTL L G+ED     H F E    +L +
Sbjct:  264 RECTLWLSERWRFWPNHGSVIKQRHSILVLDDFRYHRSESFIEDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEIKRLMRGRCTQYMASAIADPKTGKLQPPGRGLVSTRCKESWAAITPETVKKCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQ 422          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A6A3GHZ7_9STRA (DDE-1 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GHZ7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.610e-11
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    7 ENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWSTTTVADPKKGKVK 112
            EN   D+R C++ +   W+      +  H SS+L+LD++KCH    F   L  +      ++PGG T V QPCD+ +N  +K  +  +Y AWS T + D  KG  K
Sbjct:   72 ENGWMDERGCRIWMEKVWK----PYVTDHPSSLLMLDEFKCHMQTSFVRGLN-DLGTEVEIIPGGYTCVLQPCDVGINKPLKDGIRTQYNAWSITKM-DGLKGDAK 171          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A6M2CXM3_RHIMP (Putative pogo transposable element (Fragment) n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CXM3_RHIMP)

HSP 1 Score: 65.9 bits (159), Expect = 1.800e-9
Identity = 43/134 (32.09%), Postives = 67/134 (50.00%), Query Frame = 0
Query:   20 LRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWSTTTVADPKKGKVKPLVRGTVSMRVKQVW-----DQMRKCFKICGLTLNLSGNED 148
            +R  W  RPG +LF  + S+LVLD Y+ H     + SL  +   + +++PGGLT++ QP D++LN   K  V   Y+ W          G+++     TV   V   W     + +RK F+ C ++  L G ED
Sbjct:  312 IRLVWNRRPG-ALFQ-RPSMLVLDSYRGHLTADVKRSLS-DGKTDLVVIPGGLTSILQPLDVVLNKPFKGRVRELYSEWMLGDNPKTPAGRLRRPPLATVCGWVSSAWKSLPEEMVRKSFRKCCISNALDGTED 442          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A225UQ82_9STRA (Pogo transposable element (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQ82_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.760e-9
Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    7 ENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWS 99
            EN   D+R C++     W  +P  +  S+ SS+L+LD++KCH    F ++L         ++PGG T V QPCD+ +N  +K  +  +Y AW+
Sbjct:    2 ENGWMDERGCQIWFNKVW--KPYAA--SYPSSLLLLDEFKCHIQSSFIQTLNS-IGTELEIIPGGYTCVLQPCDVGINKPLKDGIRAQYNAWA 89          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A6A4AW92_9STRA (DDE-1 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AW92_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.550e-9
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0
Query:    7 ENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWSTTTVADPKKGKVK 112
            EN   D+R C++ +   W+      +    SS+L+LD++KCH    F   L  +      ++PGG T V QPCD+ +N  +K  +  +Y AWS T + D  KG  K
Sbjct:  142 ENGWMDERGCRIWMEKVWK----PYVTDLPSSLLMLDEFKCHMQTSFVRGLN-DLGTEVEIIPGGYTCVLQPCDVGINKPLKDGIRTQYNAWSITKM-DGLKGDAK 241          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A225ULM1_9STRA (Pogo transposable element n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225ULM1_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.890e-8
Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    7 ENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWS 99
            EN   D+R C++     W  +P  +  S+ SS+L+LD++KCH    F ++L         ++PGG T V QPCD+ +N  +K  +  +Y AW+
Sbjct:  254 ENGWMDERGCQIWFNKVW--KPYAA--SYPSSLLLLDEFKCHIQSSFIQTLNS-IGTELEIIPGGYTCVLQPCDVGINKPLKDGIRAQYNAWA 341          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A6A3JCE3_9STRA (DDE-1 domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JCE3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.940e-7
Identity = 30/98 (30.61%), Postives = 50/98 (51.02%), Query Frame = 0
Query:    7 ENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWSTTTVA 104
            E+   D R C++     W       + +  SS+L+LD++KCH    F   L  +   +  ++PGG T V QPCD+ LN  +K  +  +Y  W++  +A
Sbjct:   24 ESGWMDDRGCRIWAEKVW----APYVAARPSSMLLLDEFKCHKQPVFGRQLS-DLGTDLTIIPGGYTCVLQPCDVGLNKPLKDAIRAQYDDWASENMA 116          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: A0A225UIW6_9STRA (Pogo transposable element n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UIW6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.130e-7
Identity = 30/93 (32.26%), Postives = 50/93 (53.76%), Query Frame = 0
Query:    7 ENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWS 99
            EN   D+  C++     W  +P  +  S+ SS+L LD++KCH    F ++L    +    ++PGG T V QPCD+ +N  +K  +  +Y  W+
Sbjct:  124 ENGWMDECGCQIWFNKVW--KPYAA--SYPSSLLFLDEFKCHIQSSFIQTLNS-IETEPEIIPGGYTCVLQPCDVGINKPLKDGIRAQYNDWA 211          
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Match: G4ZF11_PHYSP (DDE-1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZF11_PHYSP)

HSP 1 Score: 56.6 bits (135), Expect = 1.750e-6
Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   34 SHQSSVLVLDDYKCHCDLKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWS 99
            SH SS+L+LD++KCH    F  +L  +      ++PGG T V QPCD+ +N  +K  +  +Y  W+
Sbjct:  122 SHPSSMLMLDEFKCHIQPSFIRTLN-DIGTELEIIPGGYTCVLQPCDVGINKPVKHGIRNQYNDWA 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig175.4142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KQK9_9PHAE1.470e-4346.86DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JE48_9PHAE1.660e-3142.77DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6A3GHZ7_9STRA2.610e-1134.91DDE-1 domain-containing protein n=1 Tax=Phytophtho... [more]
A0A6M2CXM3_RHIMP1.800e-932.09Putative pogo transposable element (Fragment) n=2 ... [more]
A0A225UQ82_9STRA3.760e-934.41Pogo transposable element (Fragment) n=1 Tax=Phyto... [more]
A0A6A4AW92_9STRA4.550e-933.96DDE-1 domain-containing protein n=1 Tax=Phytophtho... [more]
A0A225ULM1_9STRA1.890e-834.41Pogo transposable element n=1 Tax=Phytophthora meg... [more]
A0A6A3JCE3_9STRA3.940e-730.61DDE-1 domain-containing protein n=2 Tax=Phytophtho... [more]
A0A225UIW6_9STRA6.130e-732.26Pogo transposable element n=1 Tax=Phytophthora meg... [more]
G4ZF11_PHYSP1.750e-637.88DDE-1 domain-containing protein n=1 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 36..108
e-value: 5.6E-5
score: 22.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig175contigH-paniculata_contig175:25727..26239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig175.4142.1mRNA_H-paniculata_contig175.4142.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig175 21925..26449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig175.4142.1 ID=prot_H-paniculata_contig175.4142.1|Name=mRNA_H-paniculata_contig175.4142.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MSYGMPENSCYDKRECKLRLRGNWEGRPGTSLFSHQSSVLVLDDYKCHCD
LKFQESLKKEADANTILLPGGLTAVNQPCDLMLNMEMKREVCGRYTAWST
TTVADPKKGKVKPLVRGTVSMRVKQVWDQMRKCFKICGLTLNLSGNEDHE
RREHTFREDDPTILTEQQAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom