prot_H-paniculata_contig1742.4116.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1742.4116.1
Unique Nameprot_H-paniculata_contig1742.4116.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
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BLAST of mRNA_H-paniculata_contig1742.4116.1 vs. uniprot
Match: D8LAW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.420e-15
Identity = 52/104 (50.00%), Postives = 59/104 (56.73%), Query Frame = 0 
Query:    2 IYKEARLGRSGLGPSTASARAGYNATRPRSRAARVILPLTVTTAPSASVAERGEGMNRKKVVSAGDGKDVRGTDIHFVNSALGVQVMSNRTTSPSFTMAGPRRA 105
            +YKE RLGRSG GP+TAS RAG   TRPR  AARV+LP      P AS     E              +V    +  V+ ALG QV S R TSPSFT+AGPRRA
Sbjct:  248 LYKEDRLGRSGKGPTTASPRAGERLTRPRPIAARVVLP---KQGPRASAGGGSEXXXXXXXXXXXXXMEVAERGVIVVDGALGTQVKSRRPTSPSFTLAGPRRA 348
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1742.4116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAW1_ECTSI1.420e-1550.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1742contigH-paniculata_contig1742:9833..11219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1742.4116.1mRNA_H-paniculata_contig1742.4116.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1742 9805..11219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1742.4116.1 ID=prot_H-paniculata_contig1742.4116.1|Name=mRNA_H-paniculata_contig1742.4116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MIYKEARLGRSGLGPSTASARAGYNATRPRSRAARVILPLTVTTAPSASV
AERGEGMNRKKVVSAGDGKDVRGTDIHFVNSALGVQVMSNRTTSPSFTMA
GPRRARE
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