prot_H-paniculata_contig1740.4105.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1740.4105.1
Unique Nameprot_H-paniculata_contig1740.4105.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length207
Homology
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.260e-45
Identity = 86/203 (42.36%), Postives = 129/203 (63.55%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMA----NSKRTGHIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTF 198
            MW  T  RPDIAN VR+ A++  +P  +H +A   IL +V+RT++LGIT+  G  +G+ M  +AD+D+A+    RRSVS G V+  GG +SW SRTQ+    +++E EYV+LA+ +K V   RQ+  F++P      + V+EDNQG I++A    ++  + HIDV+HH +R  V   +++I +VE+  QHAD LTK L    F
Sbjct:   41 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDF 243          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 4.740e-44
Identity = 87/209 (41.63%), Postives = 128/209 (61.24%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMANSKRTG----HIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTFLGNDSF 204
            MW  T  RPDIAN VR+ A++  +P +VH KA   IL +V RT+ +GIT+  G  +G+ M  + D+D+A+    RRSVS G V+  GG ++W SRTQ+    +++E EYV +A+ LK V   RQ+  F++P      + V EDNQG I++A++  T     HIDV+HH +R  V+  +++I  V T  QHAD LTK + K +F  +  F
Sbjct:  108 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDF 316          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.210e-43
Identity = 86/209 (41.15%), Postives = 128/209 (61.24%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMANSKRTG----HIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTFLGNDSF 204
            MW  T  RPDIAN VR+ A++  +P +VH KA   IL +V RT+ +GIT+  G  +G+ M  + D+D+A+    RRSVS G V+  GG ++W SRTQ+    +++E EYV +A+ LK V   RQ+  F++P      + V EDNQG I++ ++  T     HIDV+HH +R  V+  +++I +V T  QHAD LTK + K +F  +  F
Sbjct:  163 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDF 371          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.070e-43
Identity = 86/203 (42.36%), Postives = 127/203 (62.56%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMA----NSKRTGHIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTF 198
            MW  T  RPDIAN VR+ A++  +P  +H +A   IL +V+RT++LGIT+  G  +G+ M  + D+D+A+    RRSVS G V+  GG ISW SRTQ+    +++E EYV+LA+ +K V   RQ+  F++P      + V EDNQG I++A    ++  + HIDV+HH +R  V   +++I +VE+  QHAD LTK L    F
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 427          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 7.880e-43
Identity = 85/209 (40.67%), Postives = 128/209 (61.24%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMA----NSKRTGHIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTFLGNDSF 204
            MW  T  RP+IAN  R+ A++  +P  +H +A   IL +V+RT++LGIT+G G  +G+ M  +AD+D+A+    RRSVS G V+   G ISW SRTQ+    +++E EYV+LA+ +K V   RQ+  F++P      + V EDNQG I++A    ++  + H DV+HH +   V   +++I YVE+  QHAD LTK L    F  + +F
Sbjct:   80 MWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALHFGDFEFHRNF 288          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 8.560e-43
Identity = 86/211 (40.76%), Postives = 130/211 (61.61%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMANSKRTG----HIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTF-LGNDSFS 205
            MW  T  RPDIAN VR+ A++  +P +VH KA   IL +V RT+ +GIT+  G  +G+ M  + D+D+      RRSVS G V+  GG ++W SRTQ+    +++E EYV +A+ LK V   RQ+  F++P      + V EDNQG I++A++  T     HID +HH++R  V+  +++I +V +  QHAD LTK + K +F L +D F+
Sbjct:   80 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAISKESFALLHDEFA 290          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.660e-42
Identity = 85/202 (42.08%), Postives = 126/202 (62.38%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMANSKRTG----HIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNT 197
            MW  T  RPDIAN VR+ A++  +P +VH KA   IL +V RT+ +GIT+  G  +G+ M  + D+D+A+    RRSVS G V+  GG ++W SRTQ+    +++E EYV +A+ LK V   RQ+  F++P      + V EDNQG I++A++  T     HIDV+HH +R  V+  +++I +V T  QHAD LTK + K +
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKES 426          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.950e-42
Identity = 86/203 (42.36%), Postives = 127/203 (62.56%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMA----NSKRTGHIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTF 198
            MW  T  RPDIAN VR+ A++  +P  +H +A   IL +V+RT++LGIT+  G  +G+ M  + D+D+A+    RRSVS G V+  GG ISW SRTQ+    +++E EYV+LA+ +K V   RQ+  F++P      + V EDNQG I++A    ++  + HIDV+HH +R  V   +++I +VE+  QHAD LTK L    F
Sbjct:  399 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 601          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 6.830e-42
Identity = 86/209 (41.15%), Postives = 123/209 (58.85%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITY-GGKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMANS----KRTGHIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTFLGNDSF 204
            MW  T  RPDIA+  R+ A++  +P +VH KA   IL +V RT+ +GIT+ GG  +G+ M  + D+D+A+    RRSVS G V+   G ++W SRTQ+    +++E EYV +A+ LK V   RQ+  FI+P      + V EDNQG I+ A++        HIDV HH +R  V+   +TI +V T  QHAD LTK   K +F  +  F
Sbjct:  115 MWLATQTRPDIADAARAVARYCPSPKMVHWKAALGILGYVRRTSWMGITFEGGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLRQVWRFILPDASMPCIPVFEDNQGAIQNAHNPIINSNLKHIDVMHHFIRELVERKDITITHVPTQVQHADFLTKASSKQSFALHRDF 323          
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Match: A0A6H5KJP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.240e-41
Identity = 83/203 (40.89%), Postives = 127/203 (62.56%), Query Frame = 0
Query:    1 MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITYG-GKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITASTSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMANSKRTG----HIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTF 198
            MW  T  RPDIAN VR+ A++  +P +VH KA   IL +V RT+ +GIT+  G  +G+ M  + D+D+A+    RRSVS G V+  GG ++W SRTQ+    +++E+EYV +A+ LK V   RQ+   ++   +   + V EDNQG I++A++  T     HIDV+HH +R  V+  +++I +V +  QHAD LTK + K +F
Sbjct:  161 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNASKAADRRSVSGGVVMCGGGGVTWFSRTQKCVTLSTTEVEYVAIADVLKEVLFLRQVWRLMLLDADMSCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESF 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1740.4105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK6_9PHAE1.260e-4542.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE4.740e-4441.63Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.210e-4341.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE3.070e-4342.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE7.880e-4340.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K2_9PHAE8.560e-4340.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE1.660e-4242.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.950e-4242.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2P8_9PHAE6.830e-4241.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJP2_9PHAE1.240e-4140.89Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..195
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1740contigH-paniculata_contig1740:5798..6418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1740.4105.1mRNA_H-paniculata_contig1740.4105.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1740 5798..6445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1740.4105.1 ID=prot_H-paniculata_contig1740.4105.1|Name=mRNA_H-paniculata_contig1740.4105.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MWTVTIKRPDIANIVRSTAKFWENPGVVHKKAVEKILPFVLRTANLGITY
GGKDSGIEMLAYADSDHATCPDTRRSVSRGAVLLAGGAISWHSRTQEITA
STSSELEYVTLAETLKYVRCPRQMEAFIMPTLESYSVTVMEDNQGGIKMA
NSKRTGHIDVKHHVVRNAVDEGKVTIVYVETGSQHADVLTKGLEKNTFLG
NDSFSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like