prot_H-paniculata_contig17194.4007.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17194.4007.1
Unique Nameprot_H-paniculata_contig17194.4007.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: D7FPC2_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC2_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 3.340e-24
Identity = 70/98 (71.43%), Postives = 74/98 (75.51%), Query Frame = 0
Query:    1 MPSSLLDMDTKQLYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPER-PDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEI 97
            M +SLLDMDT +LYAQVMKREREASQAVGKDYAARP SYKGSLSLKLDRYTQRR+S  R PDR       XXXXX      E SPPRRKA  + A EI
Sbjct:  500 MSTSLLDMDTSKLYAQVMKREREASQAVGKDYAARPASYKGSLSLKLDRYTQRRKSRSRSPDR--QRTSGXXXXXGERRAAEPSPPRRKAAPVMATEI 595          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.870e-22
Identity = 79/116 (68.10%), Postives = 82/116 (70.69%), Query Frame = 0
Query:    1 MPSSLLDMDTKQLYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPER-PDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEIRRQQELKSRYGDASASKR 115
            M +SLLDMDT +LYAQVMKREREASQAVGKDYAARP SYKGSLSLKLDRYTQRR+S  R PDR     XXXXXXXXXXXX                      ELK RYGDASASKR
Sbjct:  522 MSTSLLDMDTSKLYAQVMKREREASQAVGKDYAARPASYKGSLSLKLDRYTQRRKSRSRSPDRQRTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ELKKRYGDASASKR 636          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A835ZJP1_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.410e-16
Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 0
Query:   13 LYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPER-PDRGXXXXXXXXXXXXXXXXLEA-SPPRRKAPILSAEEIRRQQELKSRYGDASA 112
            LYAQV++ +R+AS AVGKDYA+RP SYKGSLSLK DR+T RR+S  R PDR   XXXXXXXXXXXXXX    + PRR+   ++AE +R+ + LK +YGDASA
Sbjct:  252 LYAQVVENDRKASTAVGKDYASRPTSYKGSLSLKADRFTVRRKSSSRSPDRARAXXXXXXXXXXXXXXXXXRAEPRREPAKITAESLRKAEALKRKYGDASA 353          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A2D4BTY7_PYTIN (Phosphopyruvate hydratase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTY7_PYTIN)

HSP 1 Score: 72.0 bits (175), Expect = 2.570e-12
Identity = 45/92 (48.91%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   21 EREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPERPDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEIRRQQELKSRYGDASA 112
            ER  + AVGKDYAARP SYKGSLSLKLDR+T RR+SP+R D                     S P R A  + AE   R ++L++ YGDASA
Sbjct:  699 ERRKAAAVGKDYAARPASYKGSLSLKLDRFTTRRESPKRSDPSTSSKRAPASTTAAPRDTAPSEPSRSAEEI-AEAQERMRKLRALYGDASA 789          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A8K1CAH7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAH7_PYTOL)

HSP 1 Score: 70.9 bits (172), Expect = 5.450e-12
Identity = 46/102 (45.10%), Postives = 56/102 (54.90%), Query Frame = 0
Query:   10 TKQLYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPERPDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEIRRQQELKSRYGDAS 111
            T  L AQV ++ER  + AVGKDYAARP SYKGSLSLKLDRYT R+QSP +                     E +    K   +S E   R ++L+  YGDAS
Sbjct:  281 TDDLMAQVREQERRKAAAVGKDYAARPASYKGSLSLKLDRYTTRKQSPTKRTEPARRPSNRSNAPTLPDATETTS---KPAEVSREAQERMKKLREMYGDAS 379          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A482SKP9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKP9_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-11
Identity = 56/104 (53.85%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   13 LYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPERPDRGXXXXXXXXXXXXXXXXLEASPPRR----KAPILSAEEIRRQQELKSRYGDASA 112
            L  +V++ EREAS AVGK+YA RP SYKGSLSLKLDRYT R++SP  P   XXXXXXXX         E +        K P  SAE   + + LK RYGDASA
Sbjct:  447 LLQKVLESEREASAAVGKNYAQRPASYKGSLSLKLDRYTARKKSPS-PXXXXXXXXXXXPQRLRASYTEGNQQHGGAGGKGPETSAEYQNKMKALKDRYGDASA 549          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A7S2W6Z5_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6Z5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.470e-11
Identity = 50/101 (49.50%), Postives = 57/101 (56.44%), Query Frame = 0
Query:   15 AQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPER-PDRGXXXXXXXXXXXXXXXXLEASP-PRRKAPILSAEEIRRQQELKSRYGDASAS 113
            A+V KR+RE S A GKDYA RP SYKGSLSL LDRYT R++S  R PDR               XX      PRR  P        RQ+ L+ RYGDASA+
Sbjct:  410 AEVTKRDRERSAAQGKDYAQRPASYKGSLSLALDRYTHRKKSRSRSPDRSSYRRRNSPPRGRRDXXXXXXXXPRRGRPANDG----RQKYLRDRYGDASAN 506          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A0P1ARE8_PLAHL (Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARE8_PLAHL)

HSP 1 Score: 67.4 bits (163), Expect = 1.010e-10
Identity = 46/107 (42.99%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   10 TKQLYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPERPDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEIR----RQQELKSRYGDASA 112
            T+ L  QV +RER  ++AVG+DYA+RP SYKGSLSLKLDR+T R++S     R                   +SP        S+EEIR    R +EL+  YGDAS+
Sbjct:  375 TENLLQQVRERERRKAEAVGRDYASRPASYKGSLSLKLDRWTTRKRSRSPVKREEVVVVQPGMSKGDEPHRSSSP--------SSEEIRMAEKRLEELRKMYGDASS 473          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: A0A3M6VRW2_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRW2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.370e-10
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:   13 LYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPERPDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEIRRQQELKSRYGDASA 112
            L  QV +RER  ++AVG+DYA+RP SYKGSLSLKLDR+T R++S     RG                  +SP +      S E   R Q+L+  YGDAS+
Sbjct:  365 LLQQVRERERRKAEAVGRDYASRPASYKGSLSLKLDRWTTRKRSRSPAKRGEVVVVQPGMSKGDTRSNSSSPQK------SRETEERLQKLREMYGDASS 458          
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Match: K3WW49_GLOUD (Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW49_GLOUD)

HSP 1 Score: 67.0 bits (162), Expect = 1.380e-10
Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 0
Query:   10 TKQLYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRQSPERPDRGXXXXXXXXXXXXXXXXLEASPPRRKAPILSAEEIRRQQELKSRYGDASA 112
            T+ L  QV ++ER  ++AVG+DYAARP SYKGSLSLKLDR+T RR+S     R                  E     R+A   S E   R ++L+  YGDASA
Sbjct:  381 TEDLLQQVREKERRKAEAVGRDYAARPASYKGSLSLKLDRFTTRRRSRSPTKRTETVNLGKPSSPRAAPAQEEQ---RRASESSKEAEERLRKLRMAYGDASA 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17194.4007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPC2_ECTSI3.340e-2471.43Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEK1_9PHAE1.870e-2268.10Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZJP1_9STRA4.410e-1662.75Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
A0A2D4BTY7_PYTIN2.570e-1248.91Phosphopyruvate hydratase n=1 Tax=Pythium insidios... [more]
A0A8K1CAH7_PYTOL5.450e-1245.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A482SKP9_9ARCH1.170e-1153.85Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2W6Z5_9STRA5.470e-1149.50Pre-mRNA-splicing factor 38 n=1 Tax=Rhizochromulin... [more]
A0A0P1ARE8_PLAHL1.010e-1042.99Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara hal... [more]
A0A3M6VRW2_9STRA1.370e-1043.00Pre-mRNA-splicing factor 38 n=1 Tax=Peronospora ef... [more]
K3WW49_GLOUD1.380e-1043.69Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17194contigH-paniculata_contig17194:3576..4909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17194.4007.1mRNA_H-paniculata_contig17194.4007.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17194 2063..4974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17194.4007.1 ID=prot_H-paniculata_contig17194.4007.1|Name=mRNA_H-paniculata_contig17194.4007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MPSSLLDMDTKQLYAQVMKREREASQAVGKDYAARPVSYKGSLSLKLDRY
TQRRQSPERPDRGPDRGSDRGGDRRTEKRLEASPPRRKAPILSAEEIRRQ
QELKSRYGDASASKR*
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