prot_H-paniculata_contig17162.3995.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17162.3995.1
Unique Nameprot_H-paniculata_contig17162.3995.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
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BLAST of mRNA_H-paniculata_contig17162.3995.1 vs. uniprot
Match: A0A6H5JCJ9_9PHAE (Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.860e-16
Identity = 59/136 (43.38%), Postives = 73/136 (53.68%), Query Frame = 0 
Query:   16 LTGEWHETTEDRDGEVHNILRVQ--PSS------MSSAPDEVSAGGLSKVSSMPDRPSATSCFPGWLWHGLVSEQECNKRGVAMNEGAS--VSGRLLWSMREGLFNALDDFIHTSSIGEFCARMQMLRAFSANLAT 141
            LTG W E     D +  N L++Q  P++      +S  P         KV S PD PSA   FP WLW GLVS      +GV + E +S  +    L   R GLF  LDDF+ TSSIGEF AR+QMLRAF+A L +
Sbjct: 2613 LTGHWKE-----DSQASNPLQLQCGPAAAPGGLRVSDEPSTAHRVSSEKVVSAPDWPSARGFFPDWLWSGLVSN-----KGVGVTEESSGGIDAASLDHAR-GLFQPLDDFLRTSSIGEFFARLQMLRAFAAQLGS 2737
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BLAST of mRNA_H-paniculata_contig17162.3995.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.210e-15
Identity = 57/134 (42.54%), Postives = 74/134 (55.22%), Query Frame = 0 
Query:   16 LTGEWHETTEDRDGEVHNILRVQ--PSS------MSSAPDEVSAGGLSKVSSMPDRPSATSCFPGWLWHGLVSEQECNKRGVAMNEGASVSGRLLWSMREGLFNALDDFIHTSSIGEFCARMQMLRAFSANLAT 141
            LTGEW+     +D +  N L++Q  P++      +S  P  V      KV   PD PSA+  FP WLW GLVS++     GVA      +    L   R GLF  LDDF+ TS+IGEF AR+QMLRAF+A L +
Sbjct: 3441 LTGEWN-----KDLQASNPLQLQRDPAAAPGGVPVSDGPAAVQQVPGGKVFKAPDWPSASGYFPDWLWSGLVSKKGA---GVAEESSGGLDAASLDHAR-GLFQPLDDFLRTSNIGEFFARLQMLRAFAAQLCS 3565
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17162.3995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCJ9_9PHAE8.860e-1643.38Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
D7FL28_ECTSI1.210e-1542.54Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17162contigH-paniculata_contig17162:2405..4470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17162.3995.1mRNA_H-paniculata_contig17162.3995.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17162 2207..4572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17162.3995.1 ID=prot_H-paniculata_contig17162.3995.1|Name=mRNA_H-paniculata_contig17162.3995.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MGFFRRSDGGSISTPLTGEWHETTEDRDGEVHNILRVQPSSMSSAPDEVS
AGGLSKVSSMPDRPSATSCFPGWLWHGLVSEQECNKRGVAMNEGASVSGR
LLWSMREGLFNALDDFIHTSSIGEFCARMQMLRAFSANLATV*
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