prot_H-paniculata_contig1714.3984.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1714.3984.1
Unique Nameprot_H-paniculata_contig1714.3984.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length554
Homology
BLAST of mRNA_H-paniculata_contig1714.3984.1 vs. uniprot
Match: A0A6H5JDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP5_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 2.670e-69
Identity = 197/466 (42.27%), Postives = 243/466 (52.15%), Query Frame = 0
Query:    2 KVPLQARAGRMSSRELMNALDSLGVAYPIPSPRSELEDAFVSAVLAGQGDE------TAPSEGGRAEKGIARLNPYSFTTQGEDASDGEYRPASFETYHAALRWARQLTLDDVVDELHYRRVVFKPNGEFSYLTRLLADEVLTDEELMEEEENREG---YAEVLEAAVNLNAEEISADLRAGGIEFDADLSKTELARLLVEAKSQTRTPIAGRRQAASGRPRYPDSRKRDRAAATANRKVGGQKTRAQPYGGVGSRGLFGFEDDGEEPLS-----DSD-QALLEIESIARSVGGAAWGAVQETASVFAGIASTLLPEVFPLPQEGEEDSAEEGAEGAPSRQRRRPA-------RISQKRRTRMSRDRASGLRRGASTFVQSSANRAGLALVRSAANGVLRGAEAAADWAGGGAVAREHVLLFIAAFCLAFKRGIGSSVALLVLIRAGRISLQRL-LEGGQAAATKR 444
            K  L ARA R+SSRELM ALD+LG  Y IP+PR+EL+ AFVSAVLA + DE      TA + G R E  I  ++PY      E+   G      F TYH+ALRWARQL  DDV+DEL YR V   P  ++SYLTRLLADEVL DEELM  E   EG   Y   LEAA++++A+E+  DLRAGG   D  LSK  LA  L E K + R           G P  P S       ++                            +G EP       D D   LLE+E  A+SVGG                                                              + R+ R +R+RA G+RR A+ + QSS NRAG A+++S ANG+LRGAEAAADWAG GA+ARE+VLLFIAAFCL FKRG+G++VALLV+IR GRI+ Q+L LEG +    KR
Sbjct:  382 KAALHARADRLSSRELMKALDALGAQYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGSRGEN-IVPVSPYDAPL--EEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELKYRGVEHSPRADYSYLTRLLADEVLADEELMGGEGGPEGADAYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLR-----------GEP-LPHS------GSSXXXXXXXXXXXXXXXXXXXXXXXXXXSTEGREPADPLGRRDGDGDVLLELEEAAKSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREYVLLFIAAFCLVFKRGVGAAVALLVVIRFGRIAAQKLVLEGWKMERAKR 826          
BLAST of mRNA_H-paniculata_contig1714.3984.1 vs. uniprot
Match: D7FH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH23_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.110e-44
Identity = 156/407 (38.33%), Postives = 190/407 (46.68%), Query Frame = 0
Query:    2 KVPLQARAGRMSSRELMNALDSLGVAYPIPSPRSELEDAFVSAVLAGQGDE------TAPSEGGRAEKGIARLNPYSFTTQGEDASDGEYRPASFETYHAALRWARQLTLDDVVDELHYRRVVFKPNGEFSYLTRLLADEVLTDEELMEEEENREG---YAEVLEAAVNLNAEEISADLRAGGIEFDADLSKTELARLLVEAKSQTR-TPIAGRRQAASGRPRYPDSRKRDRAAATANRKVGGQKTR--AQPYGGVGSRGLFGFEDDGEEPLSDSDQALLEIESIARSVGGAAWGAVQETASVFAGIASTLLPEVFPLPQEGEEDSAEEGAEGAPSRQRRRPARISQKRRTRMSRDRASGLRRGASTFVQSSANRAGLALVRSAANGVLRGAEAAADWAGGGAVARE 396
            K  L ARA RMSSRELM ALD LG  Y IP+PR+EL+ AFVSAVLA + DE      TA + G R  K I  ++PY   T  E+   G      F TYH+ALRWARQL  DDV+DEL YR V   P  ++SYLTRLLADEVL DEELM  E   EG   Y   LEAA++++A+E+  DLRAGG   D  LSK  LA  L E K + R  P+     +AS                         + R  A P G                                                                             +              + R+ R +R RA G+RR A+ + QSS NRAG A+++S ANG+LRGAEAAADWAG GA+ARE
Sbjct:  438 KAVLHARADRMSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAAAGTRG-KNIVAVSPYD--TPIEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEQSPRADYSYLTRLLADEVLADEELMGGEGGPEGADAYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHSGSSASXXXXXXXXXXXXXXXXXXXXXXXXXEARGPADPLGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQET-----------ERSRQVRAARQRAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALARE 830          
BLAST of mRNA_H-paniculata_contig1714.3984.1 vs. uniprot
Match: A0A836CCS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS4_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.920e-10
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0
Query:  380 GAEAAADWAGGGAVAREHVLLFIAAFCLAFKRGIGSSVALLVLIRAGRISLQRLLEGG 437
            GAEAAA+WAGGGA+ARE VLL ++ +CLAFKRG+ S++ LL  IRA RI+LQ  L GG
Sbjct:  565 GAEAAAEWAGGGAIARERVLLGVSLYCLAFKRGLWSALVLLFAIRAARITLQEALGGG 622          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1714.3984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDP5_9PHAE2.670e-6942.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH23_ECTSI1.110e-4438.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CCS4_9STRA2.920e-1065.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 398..423
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..397
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 424..553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1714contigH-paniculata_contig1714:19948..22663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1714.3984.1mRNA_H-paniculata_contig1714.3984.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1714 19599..22804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1714.3984.1 ID=prot_H-paniculata_contig1714.3984.1|Name=mRNA_H-paniculata_contig1714.3984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=554bp
MKVPLQARAGRMSSRELMNALDSLGVAYPIPSPRSELEDAFVSAVLAGQG
DETAPSEGGRAEKGIARLNPYSFTTQGEDASDGEYRPASFETYHAALRWA
RQLTLDDVVDELHYRRVVFKPNGEFSYLTRLLADEVLTDEELMEEEENRE
GYAEVLEAAVNLNAEEISADLRAGGIEFDADLSKTELARLLVEAKSQTRT
PIAGRRQAASGRPRYPDSRKRDRAAATANRKVGGQKTRAQPYGGVGSRGL
FGFEDDGEEPLSDSDQALLEIESIARSVGGAAWGAVQETASVFAGIASTL
LPEVFPLPQEGEEDSAEEGAEGAPSRQRRRPARISQKRRTRMSRDRASGL
RRGASTFVQSSANRAGLALVRSAANGVLRGAEAAADWAGGGAVAREHVLL
FIAAFCLAFKRGIGSSVALLVLIRAGRISLQRLLEGGQAAATKRTGEDTA
AGARSPRVAAVAAAAGGSTSGSGRREPTSSRGGRRNVPSGKPRRRPTIRQ
PSKTEERERRSRRTARAARAGRTRAKRGMQGRRRRPVADGLDDSDSDGGC
AIM*
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