prot_H-paniculata_contig17099.3965.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17099.3965.1
Unique Nameprot_H-paniculata_contig17099.3965.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length209
Homology
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BLAST of mRNA_H-paniculata_contig17099.3965.1 vs. uniprot
Match: D7FWZ3_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ3_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.670e-16
Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 0 
Query:    3 GSLVEIQVKVLQEMGFPEETARIALKASGYDTNLAAEYCVTGIPPGRLSSLSPPLPIAAAAAPQQQPQDGL 73
            GS VEIQV+ LQ+MGF E+ AR+AL+ASGYDTNLAAEYCVTGIPP R +S++   P AA A    + + GL
Sbjct:  121 GSPVEIQVQALQDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAAAPAPSSSRGRKGL 191
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BLAST of mRNA_H-paniculata_contig17099.3965.1 vs. uniprot
Match: A0A6H5KRK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK2_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.310e-14
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:    3 GSLVEIQVKVLQEMGFPEETARIALKASGYDTNLAAEYCVTGIPPGRLSSLSPPLPIAAAAAPQQQPQDGL 73
            GS VEIQV+ L +MGF E+ AR+AL+ASGYDTNLAAEYCVTGIPP R +S++   P A  A    + + GL
Sbjct:  343 GSPVEIQVQALLDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAATPAPSSSRGRKGL 413
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17099.3965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWZ3_ECTSI1.670e-1661.97UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KRK2_9PHAE2.310e-1459.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 13..40
e-value: 6.4E-6
score: 26.0
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 4..44
score: 10.547
NoneNo IPR availableGENE3D1.10.8.10coord: 1..46
e-value: 1.9E-9
score: 39.1
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 7..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17099contigH-paniculata_contig17099:1066..3241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17099.3965.1mRNA_H-paniculata_contig17099.3965.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17099 1028..3281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17099.3965.1 ID=prot_H-paniculata_contig17099.3965.1|Name=mRNA_H-paniculata_contig17099.3965.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MKGSLVEIQVKVLQEMGFPEETARIALKASGYDTNLAAEYCVTGIPPGRL
SSLSPPLPIAAAAAPQQQPQDGLQRPYVPARGSGVQSSVASGFGASPSSW
QPGRTYGGDGGYRSSGTNGVSNAGAAADGGGSSGGVGMSSNYRGWNSSSN
VEYPPEGPASRNSGRPVGPAPATVVAPGSLDWRTMPRRAMGEGRTSPATG
TGGGTVDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf