prot_H-paniculata_contig170.3927.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig170.3927.1
Unique Nameprot_H-paniculata_contig170.3927.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1071
Homology
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BLAST of mRNA_H-paniculata_contig170.3927.1 vs. uniprot
Match: D7FIT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT6_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 4.830e-27
Identity = 123/389 (31.62%), Postives = 173/389 (44.47%), Query Frame = 0 
Query:   48 LIMRLARLDSDYTSEFAGFATGLLAASQIRR-QCNATRPHRP----------------------LGWRRGVGLTMALGFGNVVIIHAGLWTLSAFLGADADTAGMVVAGGVI---------EGGGVGEGEEVVRLTS--------MVTAFVAAWVCYAVTGLPGALQLYDLRLVRLPLAVLAELLRASYVCAASGLVLALLP---DISGLGLVDDGVDDRNLGNLGE-------ILVIPLLRLLAATLAGAAVSAMGG-------------GQL----------AFIPHSGQTPQAHPAATADLVDGSREMETAGHNGEGRGEGGAAEGEWWFVRSGGFGGALYAVACGSVFEGIVRKYLLGDEWFASPRSVHASLGVLFSMVWVVRDV 363
            L+ +++ LD  +  E A  ATGL+AA+Q+R+ Q    RP                         L W +GV  T A  +G ++I+  G W L   L   + T  +   G +           GGG GEG+    +T+        +  A  AA VCY +TG     QL   RL+R+PL + AELLRAS V A+S + LAL+     +S   L     + R      E        LV+  L  LA   AGAAVS +GG             G+L          A  P  G +      ++A  V   RE       GE +    AA    W V SG  GG  YA+  G VF G++R+YLLG EWF+SP SV  +L ++F+ V+++R +
Sbjct:   26 LLCKISTLDFGHAVEMAVVATGLIAATQLRKWQRRQQRPFASGTVSADPRTDLSSRYRYCCEVALHWLKGVVWTWAYAYGGLIIVRVGRWALLLLLAWSSSTRALGETGKLTPEGSYWPWGRGGGGGEGDRWAAVTTSDDSLAVTLAVALGAAAVCYTLTGASSVRQLLWHRLLRVPLGLAAELLRASCVAASSEIALALVSWGFSVSSPSLAFPYKEGREETASAEGTRAFALTLVLGFLGALACAFAGAAVSCVGGSVGXXXXXEEGRRGRLERTASSATNAAEPPTGGGSRSRTGTSSAVNVAAGREAGPGRREGESQRVTAAAA---WLVPSGALGGVFYALTSGGVFRGVMREYLLGAEWFSSPDSVRMALAMVFAAVYLLRSL 411
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig170.3927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIT6_ECTSI4.830e-2731.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 719..755
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..1071
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 174..184
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 154..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig170contigH-paniculata_contig170:1325..26365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig170.3927.1mRNA_H-paniculata_contig170.3927.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig170 948..26365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig170.3927.1 ID=prot_H-paniculata_contig170.3927.1|Name=mRNA_H-paniculata_contig170.3927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1071bp
MEGTRSLESSSGGSSSSRVLWDQAVAEAELLSSSPSSASFATIGAMELIM
RLARLDSDYTSEFAGFATGLLAASQIRRQCNATRPHRPLGWRRGVGLTMA
LGFGNVVIIHAGLWTLSAFLGADADTAGMVVAGGVIEGGGVGEGEEVVRL
TSMVTAFVAAWVCYAVTGLPGALQLYDLRLVRLPLAVLAELLRASYVCAA
SGLVLALLPDISGLGLVDDGVDDRNLGNLGEILVIPLLRLLAATLAGAAV
SAMGGGQLAFIPHSGQTPQAHPAATADLVDGSREMETAGHNGEGRGEGGA
AEGEWWFVRSGGFGGALYAVACGSVFEGIVRKYLLGDEWFASPRSVHASL
GVLFSMVWVVRDVGRHRETTPTDLTADQELSTAGHKRSAEDQELSLSQVR
TFHSTLATDLQGAGRTRSSSRDREGLTAHSQIVPESRDRASERRSLCGGG
ENLREVSFAGAAGAGSRRAGERQTAISDIVAKNVLMDNTADRAISVADGC
RLYEAQGGGGGSGGSDGGSVDISAAAAYGAEAGAARFEHDTDLRNTDTEL
GYLLGGKEGPSFASSAAVAGGGDGGADSTANIAAATDRRAERTKHDHDDD
TTKSRKLRTTTGVLRGIGSDGTIMGGVANRKTATLPRREEKTAAVVDVAD
RISGSQGKDYDRNGGGASGGWKTNGEIFIDCVVPRGASIFPERNVSAGDS
IAPKVGNHLCRPVFAPKEMQQLQLQQEKQQRLKRRQQQVSEVEQARRRKA
CEEEQEEENVERFMVSPAGAGEENTDNPGGDLAAAAAKEEAADGGGWIFY
SGINNRPVVSSTADSTAISSITADATTVNGMDARGGDGVAGTSRGEPRTQ
EWRRCSPGTVGVRLQSPASAAAVATVAAGGGAGLGDAHSDVGFATAAAVS
RRRRSEEEMDGGETRKPGCVEAVTNITGSVGGGGTWIGATHASSLSGNGS
HLILPAVGGRASGSRRSGAGGCGGCNGRPSSSVSSACSPCRCRGVSSRTD
HQDGSVPANSGDGDGGGGHRDNPIHRSTKSDHDDIDHDGLACGNIGGIQL
RPGQSPTNSVFAIRGTVTDPR
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