prot_H-paniculata_contig17.3921.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17.3921.1
Unique Nameprot_H-paniculata_contig17.3921.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length180
Homology
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BLAST of mRNA_H-paniculata_contig17.3921.1 vs. uniprot
Match: D7FN63_ECTSI (Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (Mouse), isoform CRA_c n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN63_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.670e-28
Identity = 72/168 (42.86%), Postives = 96/168 (57.14%), Query Frame = 0 
Query:    4 ASLSHWWLHMYDDPSVVEQEDEYRELLGKSDVRSNIDFCDIVRSWVTVLHGKDMLATHRRRSAMDKGACNCVGQGAAAPYGCSAGLAVAVAKLGVQFSWQEKATAQNILMKSGIVRDSLVRVTRAILAGDRCRAGAVHEVSHQLMHAVQQGLTWPDEFFIGQALAAQG 171
             SL  WW     +   V+ E  YRELL K+D  S  +   +V+  ++ L  ++ +A  RRR+   KGA +C G      + CS  LAVA  KL  + S QE A  + IL KSG++RDSLVR  R +LA D  +A  V EVSH+L HA   GL WPDE  IG+AL ++G
Sbjct:  398 VSLVLWWYSPPKEAPSVQTEKRYRELLEKTDPESKEELAKLVKELISNLRHQNEMAMERRRNIKTKGARDCFGGRRVCAHACSGALAVAAVKLKRKASSQEMAHIKLILAKSGVIRDSLVRTARFLLATDPTKA--VAEVSHELFHAAYDGLIWPDEPLIGKALQSEG 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17.3921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FN63_ECTSI2.670e-2842.86Mdm2, transformed 3T3 cell double minute 2, p53 bi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17contigH-paniculata_contig17:20386..22438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17.3921.1mRNA_H-paniculata_contig17.3921.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17 20386..22439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17.3921.1 ID=prot_H-paniculata_contig17.3921.1|Name=mRNA_H-paniculata_contig17.3921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
RFVASLSHWWLHMYDDPSVVEQEDEYRELLGKSDVRSNIDFCDIVRSWVT
VLHGKDMLATHRRRSAMDKGACNCVGQGAAAPYGCSAGLAVAVAKLGVQF
SWQEKATAQNILMKSGIVRDSLVRVTRAILAGDRCRAGAVHEVSHQLMHA
VQQGLTWPDEFFIGQALAAQGVLLLLSYTR
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