prot_H-paniculata_contig1667.3767.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1667.3767.1
Unique Nameprot_H-paniculata_contig1667.3767.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1667.3767.1 vs. uniprot
Match: D7G7W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W2_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.970e-34
Identity = 72/137 (52.55%), Postives = 83/137 (60.58%), Query Frame = 0 
Query:   37 GPALVQLKIDAMFTPGGAHKTATNN-QERKTLPEGMDTENDGVAT----ATDDDI-----VRAEIGPTCYVCRGGLGNDGGDVLCSFCDRAACEGCSQNCCVCEMPHCSLCLAADFSTQFESYLCPPCIQDNKREAC 163
            G  LVQLKIDAMF   G   T  +    R    E  D E  G  +    A D D+      R E GP CY CRG LG  GGD+LCSFCDRAAC+ C Q C  CE+PHCSLCLAAD+++QFE Y CPPC QD + E+C
Sbjct:  156 GRTLVQLKIDAMFAVPGLPCTPPSECSGRNPDAELCDGECAGTTSRGDGAMDVDVGVGAEPREEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSACEVPHCSLCLAADYNSQFECYFCPPCYQDERLESC 292
[Close]
BLAST of mRNA_H-paniculata_contig1667.3767.1 vs. uniprot
Match: A0A6H5LJI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJI1_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 4.030e-30
Identity = 62/137 (45.26%), Postives = 75/137 (54.74%), Query Frame = 0 
Query:   37 GPALVQLKIDAMFTPGGAHKTATNNQERKTLPEGMDTENDGVATATDDDIVRAEIG----------PTCYVCRGGLGNDGGDVLCSFCDRAACEGCSQNCCVCEMPHCSLCLAADFSTQFESYLCPPCIQDNKREAC 163
            G  LVQLKIDAMF   G   T  +    +     +        T   D  +  ++G          P CY CRG LG  GGD+LCSFCDRAAC+ C Q C  C +PHCSLCLAAD+++QFE Y CP C QD + E C
Sbjct:  157 GRTLVQLKIDAMFAVPGLPCTPPSECSGRIANAELCDGECARTTCRGDGAMDVDVGVGAEPGEEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSACGVPHCSLCLAADYNSQFECYFCPSCYQDKRLECC 293
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1667.3767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7W2_ECTSI1.970e-3452.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LJI1_9PHAE4.030e-3045.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022773SivaPFAMPF05458Sivacoord: 94..154
e-value: 2.9E-7
score: 30.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1667contigH-paniculata_contig1667:15626..19832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1667.3767.1mRNA_H-paniculata_contig1667.3767.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1667 15164..19844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1667.3767.1 ID=prot_H-paniculata_contig1667.3767.1|Name=mRNA_H-paniculata_contig1667.3767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MQEGGAAPWGSGGWLGLSRRVGISESSAGRSREESQGPALVQLKIDAMFT
PGGAHKTATNNQERKTLPEGMDTENDGVATATDDDIVRAEIGPTCYVCRG
GLGNDGGDVLCSFCDRAACEGCSQNCCVCEMPHCSLCLAADFSTQFESYL
CPPCIQDNKREACGSSMDDVVT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022773Siva