prot_H-paniculata_contig1655.3725.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1655.3725.1
Unique Nameprot_H-paniculata_contig1655.3725.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length64
Homology
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.380e-13
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA+AAE   DV  +D+ TA L + ++EEVY+R   G+E  D VTG+P VMKL +SLYGL+QSP
Sbjct:  421 MAIAAERGYDVETMDVVTAFLQSKVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 483          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.740e-12
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA+AAE    V  +D+ TA L + ++EEVY+R   G+E  D VTG+P VMKL +SLYGL+QSP
Sbjct:   89 MAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 151          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A8H7LQC5_9AGAM (Encoded by (Fragment) n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7LQC5_9AGAM)

HSP 1 Score: 68.9 bits (167), Expect = 4.170e-12
Identity = 32/63 (50.79%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA A + +L++ Q+D+Q+A LNAPL EE+YM +PPG+E  D      FVM+L +++YGL+QSP
Sbjct: 1185 MAAAVKQNLEIHQIDVQSAFLNAPLDEEIYMEMPPGYEHPDYPRD-KFVMRLHKAVYGLKQSP 1246          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 7.760e-12
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA+AAE    V  +D+ TA L + ++EEVY+R   G+E  D VTG+P VMKL +SLYGL+QSP
Sbjct:  985 MAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 1047          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: UPI001D039E1C (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D039E1C)

HSP 1 Score: 63.9 bits (154), Expect = 9.250e-12
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEE--VYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA+AAE DL++ Q+D   A +N PL+EE  VYMRLPPGF+K   V      ++L ++LYGLR+SP
Sbjct:    1 MAIAAEFDLELDQMDAVNAFINCPLEEEEVVYMRLPPGFQKPGKV------LRLRKALYGLRRSP 59          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: F4ZG49_VERDV (Polyprotein (Fragment) n=1 Tax=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) TaxID=498257 RepID=F4ZG49_VERDV)

HSP 1 Score: 67.4 bits (163), Expect = 1.450e-11
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA+AA  DLD++Q D+  A +NA LK++VYMR+PPG+ K         ++KL ++LYGLRQSP
Sbjct:  839 MAIAARFDLDLLQYDVVNAFVNAELKQDVYMRMPPGYRKPG------LIVKLQKALYGLRQSP 895          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A6H5KFG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG1_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.000e-11
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA+AAE    V  +D+ T  L + ++EEVY+R   G+E  D VTG+P VMKL +SLYGL+QSP
Sbjct:    1 MAIAAERGYVVETMDVVTEFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSP 63          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A8H8SXC7_9AGAM (Reverse transcriptase n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8SXC7_9AGAM)

HSP 1 Score: 65.9 bits (159), Expect = 4.990e-11
Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            MA A + +L + Q+D+Q+A LNAPL EE+YM +PPG++  D      FVM+L +++YGL+QSP
Sbjct:  534 MATAVKENLKIHQIDVQSAFLNAPLDEEIYMEMPPGYKHPDHPRD-KFVMRLHKAVYGLKQSP 595          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A6H5KUT9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT9_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.000e-11
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            +A+AAEMD +V QLD++T+ L A L+E+V++++ PGFE R++  G   VMKL  SLYGL QSP
Sbjct:  358 LAIAAEMDWEVRQLDVKTSFLYADLEEDVFVKMAPGFEARNA-NGHKLVMKLGVSLYGLAQSP 419          
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Match: A0A4Q3DFT7_9RICK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DFT7_9RICK)

HSP 1 Score: 65.9 bits (159), Expect = 5.040e-11
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVMKLLRSLYGLRQSP 63
            +++AA +D  ++QLD++ A LN  L+EEVYM+LPPGF+K     G   V KL +SLYGL+QSP
Sbjct:  763 LSLAANLDWPLIQLDVKNAFLNGELEEEVYMQLPPGFDKDQ---GANKVCKLKKSLYGLKQSP 822          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1655.3725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCZ9_9PHAE3.380e-1355.56Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JVC8_9PHAE2.740e-1253.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7LQC5_9AGAM4.170e-1250.79Encoded by (Fragment) n=1 Tax=Rhizoctonia solani T... [more]
A0A6H5KY84_9PHAE7.760e-1253.97Integrase catalytic domain-containing protein n=1 ... [more]
UPI001D039E1C9.250e-1252.31reverse transcriptase (RNA-dependent DNA polymeras... [more]
F4ZG49_VERDV1.450e-1150.79Polyprotein (Fragment) n=1 Tax=Verticillium dahlia... [more]
A0A6H5KFG1_9PHAE2.000e-1152.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H8SXC7_9AGAM4.990e-1149.21Reverse transcriptase n=1 Tax=Rhizoctonia solani T... [more]
A0A6H5KUT9_9PHAE5.000e-1153.97Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Q3DFT7_9RICK5.040e-1152.38Integrase catalytic domain-containing protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..63
e-value: 1.5E-12
score: 47.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..63
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1655contigH-paniculata_contig1655:7359..7550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1655.3725.1mRNA_H-paniculata_contig1655.3725.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1655 6374..7781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1655.3725.1 ID=prot_H-paniculata_contig1655.3725.1|Name=mRNA_H-paniculata_contig1655.3725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MAVAAEMDLDVMQLDIQTASLNAPLKEEVYMRLPPGFEKRDSVTGVPFVM
KLLRSLYGLRQSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like