prot_H-paniculata_contig16448.3679.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16448.3679.1
Unique Nameprot_H-paniculata_contig16448.3679.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: A0A6H5JG90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.220e-22
Identity = 44/60 (73.33%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    1 MLPLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGAE 60
            M P+YLKSSEG+RLL   FGLHPSLV +IH V+K QMPGAK++VLA+YGE+YF+VWRGAE
Sbjct:  164 MSPVYLKSSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAE 223          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: D8LF93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 1.030e-20
Identity = 42/60 (70.00%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    1 MLPLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGAE 60
            M P+YLK SEG+RLL   FGLHPSLV +IH V+K QMPGAK++VLA+YGE+YF+VWRG E
Sbjct:  291 MSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGTE 350          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: W7TM42_9STRA (Condensin-2 complex subunit g2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM42_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.890e-19
Identity = 36/58 (62.07%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGAE 60
            P YLKS++GRRLL +LFGLHPSLV+DIHE +K Q+P AK+ ++ +YG++YF+ WR AE
Sbjct:  245 PTYLKSADGRRLLTFLFGLHPSLVVDIHETVKSQLPYAKKKLVQAYGDVYFRAWRAAE 302          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: R1DA44_EMIHU (Putative condensin (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DA44_EMIHU)

HSP 1 Score: 73.6 bits (179), Expect = 6.010e-14
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGA 59
            PL L+ +EGR+LLVYLFGLHP  + ++H  IK Q+P  ++S+   YGEIYF+ WR A
Sbjct:  203 PLVLRCAEGRKLLVYLFGLHPPFIAELHRAIKAQIPVCRKSLRDLYGEIYFRAWRAA 259          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: A0A835YRM8_9STRA (Condensin II non structural maintenance of chromosomes subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.050e-14
Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGAE 60
            P +L+   GRR L  +FGLHP+    IH V+  Q+P A+R+VLA+YGE+YF+ WRGA+
Sbjct:  246 PAFLRGDAGRRFLASVFGLHPAFAARIHAVVSAQLPRARRAVLAAYGEVYFRAWRGAD 303          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: R1EH25_EMIHU (Putative condensin n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EH25_EMIHU)

HSP 1 Score: 73.6 bits (179), Expect = 8.170e-14
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGA 59
            PL L+ +EGR+LLVYLFGLHP  + ++H  IK Q+P  ++S+   YGEIYF+ WR A
Sbjct:  203 PLVLRCAEGRKLLVYLFGLHPPFIAELHRAIKAQIPVCRKSLRDLYGEIYFRAWRAA 259          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: L8GEA4_ACACA (HEAT repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEA4_ACACA)

HSP 1 Score: 72.8 bits (177), Expect = 1.540e-13
Identity = 28/58 (48.28%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGAE 60
            P++L++++G++ LVYLFGLHP  +  IH+ IK Q+P   +S+L +YGE+YFK W+ A+
Sbjct:  280 PMFLRAADGKKFLVYLFGLHPPYIDAIHDTIKGQLPACPKSLLEAYGEVYFKAWKVAQ 337          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: A0A8B7XLR4_ACAPL (condensin-2 complex subunit G2-like isoform X1 n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XLR4_ACAPL)

HSP 1 Score: 60.8 bits (146), Expect = 2.480e-9
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    5 YLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGA 59
            YLK  +GRR L +L  + P+ +  +H+ IK Q+P   RS++ SYGEIYFK WR A
Sbjct:  235 YLKQDKGRRFLSFLLTMSPTFLERLHKTIKTQLPVCPRSLIDSYGEIYFKAWRVA 289          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: A0A834WMP4_9FABA (Condensin-2 complex subunit G2 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WMP4_9FABA)

HSP 1 Score: 60.8 bits (146), Expect = 2.480e-9
Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGAE 60
            PLYLK+ +GRR L+++FGL   L  +I  +I+ Q+P  ++S+L +YG+I F+ W+  +
Sbjct:  244 PLYLKTEDGRRFLIFIFGLSNQLAKEILSMIRSQIPFGRKSMLEAYGDILFRAWKAMD 301          
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Match: A0A151Z3S1_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3S1_9MYCE)

HSP 1 Score: 58.5 bits (140), Expect = 1.620e-8
Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    3 PLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGEIYFKVWRGA 59
            P+++KS EGR+ L++L  +HP L  +IH  +K Q+   K+S    Y EIYFK W+ A
Sbjct:  235 PIFIKSKEGRKFLIFLMTVHPLLTDEIHSTVKGQLFTCKKSDRDHYAEIYFKSWKAA 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16448.3679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JG90_9PHAE6.220e-2273.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF93_ECTSI1.030e-2070.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TM42_9STRA5.890e-1962.07Condensin-2 complex subunit g2 n=2 Tax=Monodopsida... [more]
R1DA44_EMIHU6.010e-1454.39Putative condensin (Fragment) n=1 Tax=Emiliania hu... [more]
A0A835YRM8_9STRA6.050e-1451.72Condensin II non structural maintenance of chromos... [more]
R1EH25_EMIHU8.170e-1454.39Putative condensin n=1 Tax=Emiliania huxleyi TaxID... [more]
L8GEA4_ACACA1.540e-1348.28HEAT repeat domain containing protein n=1 Tax=Acan... [more]
A0A8B7XLR4_ACAPL2.480e-949.09condensin-2 complex subunit G2-like isoform X1 n=3... [more]
A0A834WMP4_9FABA2.480e-941.38Condensin-2 complex subunit G2 n=1 Tax=Senna tora ... [more]
A0A151Z3S1_9MYCE1.620e-843.86Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024741Condensin-2 complex subunit G2PFAMPF12422Condensin2nSMCcoord: 3..59
e-value: 4.2E-16
score: 59.5
NoneNo IPR availablePANTHERPTHR16199FAMILY NOT NAMEDcoord: 2..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16448contigH-paniculata_contig16448:4245..5501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16448.3679.1mRNA_H-paniculata_contig16448.3679.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16448 4245..5511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16448.3679.1 ID=prot_H-paniculata_contig16448.3679.1|Name=mRNA_H-paniculata_contig16448.3679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
MLPLYLKSSEGRRLLVYLFGLHPSLVLDIHEVIKQQMPGAKRSVLASYGE
IYFKVWRGAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024741Condensin2_G2