prot_H-paniculata_contig16444.3676.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16444.3676.1
Unique Nameprot_H-paniculata_contig16444.3676.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length161
Homology
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: D8LG55_ECTSI (Similar to Stromal cell-derived factor 2 (SDF-2) (Partial) (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG55_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 8.470e-75
Identity = 106/152 (69.74%), Postives = 128/152 (84.21%), Query Frame = 0
Query:    7 VLGARCSVIGSGDQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHANT 158
            +L A CSV G+G+ V+VTCGSV+KLRH+ T +HLHSH IKWGGGSGQQSVT HG EDDQGSMWIVKE DGA+PCEVG+P+ CG+ +RLEHV+TG+NLHSH+F SPL+R QEVS FG+SGEGD GDSWE+ CV KG + W R  +V+LKH +T
Sbjct:   15 LLAAACSV-GAGE-VLVTCGSVIKLRHDTTRFHLHSHVIKWGGGSGQQSVTGHGGEDDQGSMWIVKEGDGALPCEVGQPVACGSVVRLEHVSTGRNLHSHNFKSPLTRGQEVSAFGDSGEGDAGDSWEVTCVHKGSETWARDESVRLKHVST 164          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A4D9DC59_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC59_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.850e-54
Identity = 87/147 (59.18%), Postives = 104/147 (70.75%), Query Frame = 0
Query:   14 VIGSGDQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHANTQR 160
            V+   D +M T GSVVKL+H P+ Y LHSH I WG GSGQQSVT+HGS DD+G +W+V E D     E G P+ CG AIRL H+ T KNLHSH FSSPLS QQEVSCFG+ G GD+GD+WE+ C+  G K W RG  V+ KH +T R
Sbjct:   22 VLSLEDDIM-TFGSVVKLQHVPSKYFLHSHQISWGSGSGQQSVTAHGSADDRGGLWVVAEGDNDPFKEGGSPVACGTAIRLGHMETSKNLHSHFFSSPLSNQQEVSCFGDGGRGDSGDNWEVVCMAPGAKFWRRGDEVRFKHKDTGR 167          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A812U349_SYMMI (Sdf2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U349_SYMMI)

HSP 1 Score: 175 bits (443), Expect = 1.880e-52
Identity = 89/152 (58.55%), Postives = 112/152 (73.68%), Query Frame = 0
Query:    7 VLGARCSVIGSGDQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHANT 158
            VL +   +I + DQV V+CGS VKL +  + +HLHSH I +G GSGQQSVT+HGS DDQGS+W++ E +G+  CE G PI+CG+ IRL H++TGKNLHSH F SPLS   EVS FGE+G GD GD+WE+QC RKG   W RG  V+LKH +T
Sbjct:   12 VLSSLLCLISAEDQV-VSCGSAVKLLNVQSNHHLHSHGIAYGSGSGQQSVTAHGSVDDQGSLWLLTEGEGSPLCEAGTPIKCGSRIRLRHMSTGKNLHSHMFKSPLSGNFEVSGFGENGHGDTGDNWEVQC-RKGPY-WLRGEHVQLKHVDT 160          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A835YSR9_9STRA (MIR motif-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.120e-51
Identity = 77/143 (53.85%), Postives = 99/143 (69.23%), Query Frame = 0
Query:   15 IGSGDQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHAN 157
            + +G  V VTCGS VKL+H  TGY LHSH ++WG GSGQQSVT++G+ DDQG ++IVKE    +PCE G  ++CG  +RLEH+ T KNLH+H F SPL R QEVS FGE G+GD+GD+W ++CV      W +   V   H N
Sbjct:   16 LAAGRDVEVTCGSTVKLQHVKTGYQLHSHQVRWGAGSGQQSVTANGAADDQGELFIVKEPHNGLPCEAGTVVKCGGIVRLEHMFTQKNLHTHRFVSPLLRLQEVSAFGEEGDGDSGDNWVVECVDPSSGSWLKDGKVSRLHLN 158          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A7S3H152_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H152_9STRA)

HSP 1 Score: 166 bits (420), Expect = 8.570e-49
Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = 0
Query:   19 DQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFG-ESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHANT 158
            D   VTCGSV+KL H+ TG +LHSH I WG GSGQQSVT++  ++D+GS+W+VKE   A PCEVG+P++CG  IRLEH+ T KNLHSH F +PLS  QEVS FG E+G GD GD+W++ C    +  W R   V  +HA+T
Sbjct:   32 DNDPVTCGSVIKLIHKETGNNLHSHGIAWGSGSGQQSVTTNSVKNDKGSLWLVKEGFRAAPCEVGKPVQCGETIRLEHLDTRKNLHSHLFRAPLSGNQEVSAFGDENGNGDTGDNWQVHCDSSADAVWNRKKPVVFRHADT 172          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A7R9U8V6_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8V6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 8.780e-47
Identity = 76/139 (54.68%), Postives = 97/139 (69.78%), Query Frame = 0
Query:   23 VTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFG-ESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHANTQR 160
            +TCGS++ L H  T Y LHSHPI WG GSGQQS+T+ GS+ DQ ++W+V+EA G   C VGEPI CG  +RL+H+ TGKNLHSH++ +PLS  QEV+ FG E+GEGD+GD W + C       W R   V+LKH  T R
Sbjct:   50 ITCGSLLTLVHSSTSYMLHSHPIAWGSGSGQQSITTSGSDRDQDNLWLVREASGKEACRVGEPIPCGGTVRLQHMKTGKNLHSHNYRAPLSGNQEVTGFGDETGEGDDGDDWRVLCGSNKSGYWRRSKDVRLKHDLTGR 188          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A7S3DBZ2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DBZ2_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 1.560e-45
Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 0
Query:   19 DQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVR-KGEKKWTRGAAVKLKHANTQR 160
            D   VTCGS +KL++  +G+ LHSH +KWG GSGQQSVTS GS+DD  S+W+V    G   C  G P++CG  IRL H AT  NLHSH F SPLS+QQEVS FG  GEGD GD+W + C+  +    W R +A++ +HA+T++
Sbjct:   24 DFSTVTCGSSIKLKNRASGFRLHSHDVKWGSGSGQQSVTSTGSKDDPNSLWVVHAKHGDPMCPRGTPVKCGDTIRLMHSATRANLHSHLFRSPLSQQQEVSAFGVEGEGDTGDNWIVDCLNAQPGSNWDRKSAIRFRHADTRK 166          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: M4BGB8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGB8_HYAAE)

HSP 1 Score: 157 bits (398), Expect = 1.130e-44
Identity = 80/148 (54.05%), Postives = 99/148 (66.89%), Query Frame = 0
Query:   23 VTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQ-EVSCFGESGEGDNGDSWELQCVRKGEKK-----------WTRGAAVKLKHANT 158
            VTCGS +KL HEP+ Y LHSH I +G GSGQQSVT+H + +D  S WIVKE DGA  CE G+PIECG  IRLEH+ T +NLHSH+F +PLS Q  EVS +G +GEGD  DSW ++C    +             W RGA V+L+H +T
Sbjct:  105 VTCGSSIKLVHEPSRYRLHSHDIAYGSGSGQQSVTTHMARNDVNSYWIVKEGDGAAVCEAGKPIECGTTIRLEHLQTRRNLHSHTFKAPLSSQHLEVSAYGVAGEGDGLDSWVVECQENQQCSAEAQCDDDDGLWKRGALVRLRHQST 252          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A2G8LLR4_STIJA (Putative stromal cell-derived factor 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LLR4_STIJA)

HSP 1 Score: 154 bits (390), Expect = 1.890e-44
Identity = 78/146 (53.42%), Postives = 97/146 (66.44%), Query Frame = 0
Query:   15 IGSGDQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVRKGEKKWTRGAAVKLKHANTQR 160
            +G+ D   VTCGSV+KL +   G  LHSH IK+G GSGQQSVT+ G   DQ S W VK       C+ G P+ECG+ IRL HVAT +NLHSH F SPLS  QEVSCFGE GEGD GD+W + C  +   +W R  A++LKH  +++
Sbjct:   32 VGAFDYEFVTCGSVIKLMNTRHGVRLHSHDIKYGSGSGQQSVTAVGDTTDQNSYWQVKGKTDTQ-CQRGTPVECGSTIRLLHVATRRNLHSHDFQSPLSHNQEVSCFGEDGEGDAGDNWVVVCSTQ---QWRRNDAIRLKHVVSEK 173          
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Match: A0A7S1C1A8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1A8_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.900e-44
Identity = 79/143 (55.24%), Postives = 95/143 (66.43%), Query Frame = 0
Query:   23 VTCGSVVKLRHEPTGYHLHSHPIKWGGGSGQQSVTSHGSEDDQGSMWIVKEADG----AMPCEVGEPIECGAAIRLEHVATGKNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQC---VRKGEKKWTRGAAVKLKHANT 158
            VTCGS +KL H  TG  LHSH + WG GSGQQSVT+   +DD  S+W+VKEA G    A PC  G  + CG+ +RLEH ATGKNLHSH  ++P+SR QEVS FG+ G GD GD W+L C    +     W RG AV+LKHA T
Sbjct:   63 VTCGSAIKLTHASTGAVLHSHDLAWGSGSGQQSVTAVRWQDDGNSVWVVKEAHGEAQRAAPCRRGAAVACGSLLRLEHTATGKNLHSHFEAAPISRNQEVSAFGKGGSGDAGDDWQLLCDADAKGPNSVWLRGRAVRLKHAAT 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16444.3676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG55_ECTSI8.470e-7569.74Similar to Stromal cell-derived factor 2 (SDF-2) (... [more]
A0A4D9DC59_9STRA4.850e-5459.18Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A812U349_SYMMI1.880e-5258.55Sdf2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A835YSR9_9STRA3.120e-5153.85MIR motif-containing protein n=1 Tax=Tribonema min... [more]
A0A7S3H152_9STRA8.570e-4956.03Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R9U8V6_9STRA8.780e-4754.68Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3DBZ2_9EUKA1.560e-4552.45Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
M4BGB8_HYAAE1.130e-4454.05Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A2G8LLR4_STIJA1.890e-4453.42Putative stromal cell-derived factor 2 n=1 Tax=Sti... [more]
A0A7S1C1A8_9STRA1.900e-4455.24Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016093MIR motifSMARTSM00472mir_2coord: 20..74
e-value: 0.0037
score: 26.5
coord: 83..138
e-value: 7.2E-12
score: 55.4
IPR016093MIR motifPFAMPF02815MIRcoord: 60..156
e-value: 1.1E-8
score: 35.1
IPR016093MIR motifPROSITEPS50919MIRcoord: 142..160
score: 6.18
IPR016093MIR motifPROSITEPS50919MIRcoord: 83..138
score: 14.647
IPR016093MIR motifPROSITEPS50919MIRcoord: 20..74
score: 12.738
NoneNo IPR availableGENE3D2.80.10.50coord: 10..160
e-value: 3.5E-46
score: 159.1
NoneNo IPR availablePANTHERPTHR46809FAMILY NOT NAMEDcoord: 18..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.533
IPR036300Mir domain superfamilySUPERFAMILY82109MIR domaincoord: 23..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16444contigH-paniculata_contig16444:1128..3092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16444.3676.1mRNA_H-paniculata_contig16444.3676.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16444 1128..3092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16444.3676.1 ID=prot_H-paniculata_contig16444.3676.1|Name=mRNA_H-paniculata_contig16444.3676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
MFLCVCVLGARCSVIGSGDQVMVTCGSVVKLRHEPTGYHLHSHPIKWGGG
SGQQSVTSHGSEDDQGSMWIVKEADGAMPCEVGEPIECGAAIRLEHVATG
KNLHSHSFSSPLSRQQEVSCFGESGEGDNGDSWELQCVRKGEKKWTRGAA
VKLKHANTQR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016093MIR_motif
IPR036300MIR_dom_sf