prot_H-paniculata_contig1643.3669.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1643.3669.1
Unique Nameprot_H-paniculata_contig1643.3669.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1643.3669.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 4.230e-22
Identity = 50/60 (83.33%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:    1 MLAETVAAVGFEQTVKCVVPLLAPLAADQEQVVRQHLGEQLDEIARLCKSMGKEAGYRLI 60
            MLAETV AVGFEQTVK VVPLL PLA DQE VVRQHLGEQL+EIAR C+  GKEAGYRLI
Sbjct:   42 MLAETVTAVGFEQTVKSVVPLLGPLAEDQELVVRQHLGEQLEEIARFCRLQGKEAGYRLI 101
[Close]
BLAST of mRNA_H-paniculata_contig1643.3669.1 vs. uniprot
Match: A0A6H5JCV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV5_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 5.280e-22
Identity = 49/60 (81.67%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:    1 MLAETVAAVGFEQTVKCVVPLLAPLAADQEQVVRQHLGEQLDEIARLCKSMGKEAGYRLI 60
            MLAET  AVGFEQTVK VVPLL PLA DQE VVRQHLGEQL+EIAR C+  GKEAGYRLI
Sbjct:   42 MLAETATAVGFEQTVKSVVPLLGPLAEDQELVVRQHLGEQLEEIARFCRLQGKEAGYRLI 101
[Close]
BLAST of mRNA_H-paniculata_contig1643.3669.1 vs. uniprot
Match: A0A7S2XRP8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRP8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.280e-6
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0 
Query:    1 MLAETVAAVGFEQTVKCVVPLLAPLAADQEQVVRQHLGEQLDEIARLC-----KSMGKEAGYRLII 61
            MLAET ++VG   T++ +VPLL PL AD E ++RQHL  QL  +A  C     K    E GY++++
Sbjct:   66 MLAETSSSVGTNATLRTLVPLLPPLVADPESIIRQHLATQLLPMALTCMYVDEKQNYNERGYQVVM 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1643.3669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTC4_ECTSI4.230e-2283.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCV5_9PHAE5.280e-2281.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XRP8_9STRA2.280e-643.94Hypothetical protein n=1 Tax=Attheya septentrional... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..61
e-value: 3.4E-5
score: 25.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1643contigH-paniculata_contig1643:2749..4258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1643.3669.1mRNA_H-paniculata_contig1643.3669.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1643 2734..4258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1643.3669.1 ID=prot_H-paniculata_contig1643.3669.1|Name=mRNA_H-paniculata_contig1643.3669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MLAETVAAVGFEQTVKCVVPLLAPLAADQEQVVRQHLGEQLDEIARLCKS
MGKEAGYRLIIEASK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like