prot_H-paniculata_contig1640.3658.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1640.3658.1
Unique Nameprot_H-paniculata_contig1640.3658.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1358
Homology
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: D8LP28_ECTSI (TSO1 transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP28_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 2.370e-54
Identity = 98/135 (72.59%), Postives = 108/135 (80.00%), Query Frame = 0
Query:  433 PLLDGCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNV------FDTGTGVVERVLGTVP 561
            P  DGCNCKRS+CLKLYCQCFAMQ VCT SCNCH CYNNA QESMR+QAINGVLERNP+AFDAKF+  E+ ++VVHKTGCKCRKSACLKKYCECFNKGV CSEKCNC+GCRN       +  G    ER +   P
Sbjct:   21 PTTDGCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNANQESMRLQAINGVLERNPAAFDAKFRETEKHDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVGCRNTVALYSEYRGGGAAAERAIPIAP 155          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A6H5JPL0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL0_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 3.460e-52
Identity = 105/157 (66.88%), Postives = 118/157 (75.16%), Query Frame = 0
Query:  388 LRAICPKGAAPTEVVTPTPLPKRAVPAQPQQGQQQGQPGPASENGPLLDGCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRN 544
            LR ICPKG+    +V  +    R VP           P    E+ P  DGCNCKRS+CLKLYCQCFAMQ VCT SCNCH CYNN+ QESMR+QAINGVLERNP+AFDAKF+  E+ ++VVHKTGCKCRKSACLKKYCECFNKGV CSEKCNC+ CRN
Sbjct:  343 LRPICPKGSVDGGMVVSS-TSGRLVP-----------PSNVHES-PTTDGCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNSNQESMRLQAINGVLERNPAAFDAKFRETEKHDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVACRN 486          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: I2CP39_NANGC (Tesmin tso1-like cxc domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP39_NANGC)

HSP 1 Score: 166 bits (421), Expect = 6.270e-40
Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 0
Query:  434 LLDGCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNVFDTGTGVVERVL 557
            +  GCNCKRSRCLKLYCQCFA Q  C  SCNC +C N AGQ  +R +AI  ++ERNP+AF  KF+     E  VHK GCKCRKSACLKKYCECFN G  CS+KC+C+GC+NV   G    E V+
Sbjct:  221 VAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPN--GEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVM 342          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: K8YUM5_NANGC (Tesmin tso1-like cxc domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUM5_NANGC)

HSP 1 Score: 166 bits (421), Expect = 6.380e-40
Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 0
Query:  434 LLDGCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNVFDTGTGVVERVL 557
            +  GCNCKRSRCLKLYCQCFA Q  C  SCNC +C N AGQ  +R +AI  ++ERNP+AF  KF+     E  VHK GCKCRKSACLKKYCECFN G  CS+KC+C+GC+NV   G    E V+
Sbjct:  221 VAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPN--GEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVM 342          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A4D9CLN2_9STRA (CRC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLN2_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.600e-38
Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 0
Query:  434 LLDGCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNVFDTGTGVVERVL 557
            +  GCNCKRSRCLKLYCQCFA Q  C  SCNC +C N AGQ  +R +AI  ++ERNP+AF  KF+     E  VHK GCKCRKSACLKKYCECFN G  CS+KC+C+GC+NV   G    E V+
Sbjct:  383 VAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPN--GEDAVHKVGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVM 504          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A7R9YCA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCA5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.270e-31
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 0
Query:  437 GCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSES-------VVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNV 545
            GCNC+RS+CLKLYC CFA + +C  SCNC  C+N+   E+ R +AI+ +LERNP+AFDAKF   E   +       + HK GC+CRKS CLKKYCECF     C E+C+CI C+N+
Sbjct:  160 GCNCRRSKCLKLYCVCFAAKQICVASCNCQMCHNSREHEADRQKAIHSILERNPTAFDAKFAGSEARTADATSRPGIRHKRGCRCRKSGCLKKYCECFQAHAACGERCSCIDCKNM 275          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A1Z5JA25_FISSO (CRC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA25_FISSO)

HSP 1 Score: 137 bits (346), Expect = 5.990e-31
Identity = 62/119 (52.10%), Postives = 80/119 (67.23%), Query Frame = 0
Query:  437 GCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFK----TQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNVFDTGTG 551
            GC CK++RCLKLYCQCF  +  C  +C C +CYN   +++ R +AI  +L RNPSAFD+KFK    T+  +  + HK GCKCRKS+C+KKYCEC+   V CS  C CI C+N    GTG
Sbjct:  189 GCTCKKTRCLKLYCQCFQAELYCGSNCRCLNCYNVVAEDAKRKEAIQSILLRNPSAFDSKFKKDAATERAARELAHKLGCKCRKSSCMKKYCECYAGNVKCSANCRCINCKN---RGTG 304          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A1Z5K659_FISSO (CRC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K659_FISSO)

HSP 1 Score: 137 bits (344), Expect = 2.250e-30
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0
Query:  437 GCNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFK--------TQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRN 544
            GC CK++RCLKLYCQCF  +  C  +C C SCYN   +E+ R +AI  +L RNPSAFD+KFK          E +  + HK GCKCRKS+C+KKYCEC+   V CS  C CI C+N
Sbjct:  217 GCTCKKTRCLKLYCQCFQAELYCGTNCRCLSCYNVVAEEAKRKEAIQSILLRNPSAFDSKFKKDGVTERSAHELARELAHKLGCKCRKSSCMKKYCECYAGNVRCSSNCRCINCKN 332          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A7S1C0F8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0F8_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.260e-30
Identity = 67/125 (53.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:  427 PASENGPLLDGCNCKRSRCLKLYCQCFAMQTVCTIS-CNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERS------ESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRN 544
            P    G    GC CK+S+CLKLYCQCFA   +C  + C C  CYN     S+R +AI  +LERNP+AFD KF  +  S      ++  HK GCKCRKSACLKKYCECFN GV CS+ C CI C+N
Sbjct:  286 PVQSQGHPDFGCTCKKSKCLKLYCQCFAASQLCDSAICRCLVCYNTEAHYSIRKEAIAAILERNPTAFDKKFMDKTTSAGSRSTKTGAHKVGCKCRKSACLKKYCECFNMGVKCSQNCRCINCQN 410          
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Match: A0A7S3YLM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLM9_HETAK)

HSP 1 Score: 128 bits (322), Expect = 4.060e-30
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  434 LLDG----CNCKRSRCLKLYCQCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNVFDTGTG 551
            L DG    CNCK+S+CLKLYC+CFA    C  +CNC  C N    E+ R  AI  +LERNP AF +K   +E      H TGC C+KS+CLKKYCECF  GVPCS +C C  C N    GTG
Sbjct:   38 LSDGKKGVCNCKKSKCLKLYCECFAAGKYCG-ACNCVDCQNAPATEAQRQDAIKAILERNPKAFSSKI-NREALHKQHHSTGCNCKKSSCLKKYCECFQAGVPCSARCKCAACLNGLQ-GTG 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1640.3658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP28_ECTSI2.370e-5472.59TSO1 transcription factor (Partial) (Fragment) n=1... [more]
A0A6H5JPL0_9PHAE3.460e-5266.88CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
I2CP39_NANGC6.270e-4060.48Tesmin tso1-like cxc domain-containing protein (Fr... [more]
K8YUM5_NANGC6.380e-4060.48Tesmin tso1-like cxc domain-containing protein (Fr... [more]
A0A4D9CLN2_9STRA3.600e-3860.48CRC domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7R9YCA5_9STRA3.270e-3153.45Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1Z5JA25_FISSO5.990e-3152.10CRC domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A1Z5K659_FISSO2.250e-3052.59CRC domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S1C0F8_9STRA3.260e-3053.60Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3YLM9_HETAK4.060e-3052.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 433..474
e-value: 1.4E-9
score: 47.8
coord: 507..548
e-value: 1.8E-14
score: 64.1
IPR005172CRC domainPFAMPF03638TCRcoord: 437..471
e-value: 6.2E-11
score: 42.4
coord: 510..544
e-value: 2.2E-11
score: 43.9
IPR005172CRC domainPROSITEPS51634CRCcoord: 434..547
score: 29.053
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 208..640
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 208..640

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1640contigH-paniculata_contig1640:1883..13050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1640.3658.1mRNA_H-paniculata_contig1640.3658.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1640 928..14576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1640.3658.1 ID=prot_H-paniculata_contig1640.3658.1|Name=mRNA_H-paniculata_contig1640.3658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1358bp
MEGHPTLQQGSSAGETIAAAAPITPLMVTPTPPTLPQAAPPDNLASSLSH
NSDLPSPPPLPHALESGRRSCESGEENRTSSAYILLQLRDVGRSASGGSS
LISAAVGVAVGVDSATGVGRGTTTAVTDAARMGSRGSGGGGGQCGVHTMG
VNSSASVEPQYRQGEGRRGMTDPAAAAVAASATQGMYVPVSPLLPGFQGN
EAAGAAATAAVGRAAPSPSPPPLNNSQNGAHSPQMISQQHHHHHHQQQQQ
QIPHHNNEQHQQQVLHTHHHHVHHHQARHQPISEHQQQHQHQHQQHQRNQ
QLANQAPRQMSPQPQQQQHQHQQQQHQHQQHQQLHHLPQHQLPPRGAVPP
AAGHGGHEGSEPDESAAAAAAKHAAAINAAASVAAVGLRAICPKGAAPTE
VVTPTPLPKRAVPAQPQQGQQQGQPGPASENGPLLDGCNCKRSRCLKLYC
QCFAMQTVCTISCNCHSCYNNAGQESMRMQAINGVLERNPSAFDAKFKTQ
ERSESVVHKTGCKCRKSACLKKYCECFNKGVPCSEKCNCIGCRNVFDTGT
GVVERVLGTVPDIAPAPKLGNGARGAGAGSPGDGGAAGARVESVRRKGVA
APPAGAWVAGGGGVVSARGSGATGHDQQHQQEENRRRMAKRGRSGSNDSG
GRGGGGGRGKDGGILKAAEDLAALKAASPKKSLSRPTTYNKRKRRPNTSS
PHGGEKSFPDNANRRQQEQQEQPQQHLLYPILHPAASPDASSNMVTGDAT
LDRMQPQTLPHGMSGVDHNKSSSSRSSNNDHSNGSGGGDVGSDTRNITGW
QTSRRPGHPNGIVRRRTGGGGEGGIEGGAGVSSLNNSNGNGSMPAASAAA
TAAAITSGRESPSATIRTSAAGLVELGKLHEFASWGGSSPAASGTAVPAP
APRTESATATATQLVSTLAEASPGQGGRGGGGGAEGGDGDGSRERWGLVE
SSDGGGVDVGESGASAKGASVPKLQAVTVDGVAVQSIPGAGAAAAVPPPP
TPPSLSPSLSWYHPSPTAGYDLAATADYLAAAVNRLDEIGLQKKREQQQQ
QHHNVPQQETTQSDFNSSRYQELVMGRKTSSTPAAAAMVMAMAMGAPQGR
GCTASTSTIHSKGVSSEVAAAAAGEKKNSCENSSRATIAPPSSLPSTPLP
LPRQSPLEEHDHETRKRPPDDATEVATTEREAQATAETSPKSDVHPNFPH
PCTMSTLSAAAAAAAAAINKRQRLNLPDDNSTPILKTPDNGGGDDKTEKA
TPSSSQAPPYSTTRAASAPATPRANSDEGGPTPPVDIAAGGQPPAGPVAV
AGVSGEGRGSAMEGGTAAAPVGGGSSSSPSSAGAEQPRPAAGVRSGDILL
HPHAIKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam