prot_H-paniculata_contig16375.3645.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16375.3645.1
Unique Nameprot_H-paniculata_contig16375.3645.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length191
Homology
BLAST of mRNA_H-paniculata_contig16375.3645.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.520e-25
Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 0
Query:    4 GRTSQNAVNHLRYNADMMMLAHNDPGDGAGFTCNKRVLMDDLNGNSSGPVRAALPLMNDIPVESAKTDIPPRCCLFLANSWYGRYFNMGDTVISLGAESNQIMETALDRARKVEVSVASSDGAREEVAKRAETGFLAAYKEGKFKAASSPANEVLIRHGILPDRVPVDTTPAKIKAIVAAEVERQ 188
            GR    A NHL+ + DM++L HN+   GA FTCNKRV +DD  G  S     ++ LM D+  E A TDI  R   FL N    RY + GDTV SL AE + ++E AL+R+R+VEV VA+ +  +EEV K     F  AYK GK+KA++S A E +I    LP  +  +  P ++   V + + ++
Sbjct:  437 GRPPIRAENHLKNHLDMVLLIHNE---GATFTCNKRVTVDDPFGFGSD-ASPSMQLMTDVEYEGAATDIVMRPLHFLIN----RYTHAGDTVASLSAERHNVVEAALERSRRVEVFVANPNS-KEEVRKNLLASFSRAYKAGKWKASTSLAQERVISPSCLPLGLEANVIPHEVHRFVDSTMNQE 612          
BLAST of mRNA_H-paniculata_contig16375.3645.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 9.910e-12
Identity = 60/173 (34.68%), Postives = 79/173 (45.66%), Query Frame = 0
Query:   25 HNDPGDGAG--FTCNKRVLMDDLNG-----NSSGPV-------RAALPLMNDIPVESAKTDIPPRCCLFLANSWYGRYFNMGDTVISLGAESNQIMETALDRARKVEVSVASSD--GAREEVAKRAETGFLAAYKEGKFKAASSPANEVLIRHGILPDRVPVDTTPAKIKAIV 181
            HN  GDG G  FTCN  V      G     +S G         R   PLM D+P +            F    W       GDTV+S+ AES+ ++E AL+  RKVE  + +S+  GA   V  R E  +  A+++G F    S +    I HG LPD +P  TTP +I A V
Sbjct:  247 HNGCGDGGGMNFTCNDTVTPQSFTGRRSAGSSDGSTWSTASGRRIPSPLMGDVPRKGVTRGYHDNVVQFAIQRWT----KAGDTVVSMHAESDGVVECALNLGRKVEAFLVASEHHGA---VTTRVEEAWEGAWRKGLFTDDGSASEITYISHGSLPDGIPETTTPNRILADV 412          
BLAST of mRNA_H-paniculata_contig16375.3645.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 6.820e-11
Identity = 59/173 (34.10%), Postives = 78/173 (45.09%), Query Frame = 0
Query:   25 HNDPGDGAG--FTCNKRVLMDDLNG-----NSSGPV-------RAALPLMNDIPVESAKTDIPPRCCLFLANSWYGRYFNMGDTVISLGAESNQIMETALDRARKVEVSVASSD--GAREEVAKRAETGFLAAYKEGKFKAASSPANEVLIRHGILPDRVPVDTTPAKIKAIV 181
            HN  GDG G  FTCN  V      G     +S G         R   PLM D+P +            F    W       GDTV+S+ AES+ ++E AL+  RKVE  + +S+  GA   V  R E  +  A+++G F      +    I HG LPD +P  TTP +I A V
Sbjct:  748 HNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGRRIPSPLMGDVPHKGVTRGYHDNVVQFAIQRWT----KAGDTVVSMHAESDGVVEGALNLGRKVEAFLVASEHHGA---VTTRVEEAWEGAWRKGLFTDDGDASEITYISHGSLPDGIPEITTPHRILADV 913          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16375.3645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE2.520e-2541.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ29_ECTSI9.910e-1234.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK41_9PHAE6.820e-1134.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16375contigH-paniculata_contig16375:4439..5462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16375.3645.1mRNA_H-paniculata_contig16375.3645.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16375 3764..5462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16375.3645.1 ID=prot_H-paniculata_contig16375.3645.1|Name=mRNA_H-paniculata_contig16375.3645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=191bp
MRAGRTSQNAVNHLRYNADMMMLAHNDPGDGAGFTCNKRVLMDDLNGNSS
GPVRAALPLMNDIPVESAKTDIPPRCCLFLANSWYGRYFNMGDTVISLGA
ESNQIMETALDRARKVEVSVASSDGAREEVAKRAETGFLAAYKEGKFKAA
SSPANEVLIRHGILPDRVPVDTTPAKIKAIVAAEVERQCAT
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