prot_H-paniculata_contig16337.3628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16337.3628.1
Unique Nameprot_H-paniculata_contig16337.3628.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 2.850e-63
Identity = 112/184 (60.87%), Postives = 131/184 (71.20%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMHRGHSFGVPSAWAAKLNPPRESLFDVLERRALPLPIRCSIFGDLDGRVMAESDGGGGGDGGTPLWSAHKLGYRRELDAVWTGRRF 184
            ++GVTR L D QREI +FV A+T LVGH ++ DLRAL+LVHRRLIDT +LYP+ RG  FK GL+    T LGR IQG  +GHDS EDA+ASLELALLKMHRG +F +PS WAAK NPP+ESLF+ LERR    P+RC + GDL+ R  AE   G      TPLWS    GYRRE DAVW   RF
Sbjct:  604 LKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSKTVLGRAIQGGDAGHDSGEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFESLERREPTRPLRCKVSGDLEARGSAEHPPG------TPLWSVFNCGYRREQDAVWAATRF 781          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.260e-42
Identity = 82/183 (44.81%), Postives = 114/183 (62.30%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQR--SGHDSVEDAYASLELALLKMHRGHSFGVPSAWAAKLNPPRESLFDVLERRALPL--PIRCSIFGDLDGRVMAESDGGGGGDGGTPLWSAHKLGYRRELDAVW 179
            ++GVT  L DVQ ++   + + T LVGH ++GDLRAL+LVH R+IDT  LYP P+G  +K GL++ C   LGR +Q     SGHDS+ DA A++ELALLKM +G + G+P  WA++  PPR+ +FD L R   P   P+  S+ GD +GR+  +          + LW+    GYRRE DA W
Sbjct:  153 LEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGMPYKRGLRQLCKELLGRDVQPGSGVSGHDSIMDAAAAMELALLKMAKGSTQGLPVPWASEPLPPRQPIFDALSRARSPTAEPLMISVAGDFEGRLDPQYRPE------SKLWTCFANGYRREADAAW 329          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A0L0G7E4_9EUKA (Exonuclease domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G7E4_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 6.450e-28
Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMHRGHSFGV 107
            ++GVT  + DVQ  IR+ + A+  L+GH +E DLRA+KLVHRR+IDT  LYPHP G   K GLK  C T L R IQ    GHDS+EDA A L L  LKM +G  FG+
Sbjct:  104 LKGVTTTVLDVQTRIRSLIPANAILLGHSLENDLRAMKLVHRRVIDTSLLYPHPGGNGLKQGLKTLCRTHLDRSIQEGVGGHDSIEDARACLALYALKMKKGPRFGI 210          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A1U8AV44_NELNU (small RNA degrading nuclease 5 isoform X1 n=3 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AV44_NELNU)

HSP 1 Score: 117 bits (294), Expect = 2.070e-27
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMHRGHSFGVPSAWAAK 114
            + GVT  L D+Q E+   V  +T LVGH +E DL ALK+ H  +IDT  LY HPRGG FK  L+     FL R+IQG  +GHDSVEDA A++ELALLK+  G  +G P  +  K
Sbjct:  313 LDGVTTTLKDIQEELLKLVYKETILVGHSLENDLLALKISHDMVIDTAVLYKHPRGGHFKTALRVLARRFLSREIQGSGNGHDSVEDARAAMELALLKIRHGPEYGSPPTFMRK 426          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A7J7BTH4_TRIWF (Small RNA degrading nuclease 5 isoform X2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7BTH4_TRIWF)

HSP 1 Score: 113 bits (283), Expect = 2.830e-27
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMHRGHSFGVPSAWAAK 114
            + GV  +L DVQ + R  V  +T LVGH +E DL ALK+ H  +ID   LY HPRGG+FK  L+     FL ++IQ   SGHDS+EDA A+++LALLK+  G  FG P ++  K
Sbjct:  169 LNGVMTRLKDVQEDFRKLVYKETILVGHSLENDLLALKISHELVIDIALLYKHPRGGSFKTALRVLAKKFLSKEIQQSGSGHDSIEDAKAAMDLALLKIKHGPDFGSPPSFIRK 282          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A388LS10_CHABU (Exonuclease domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LS10_CHABU)

HSP 1 Score: 117 bits (292), Expect = 3.660e-27
Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRS-GHDSVEDAYASLELALLKMHRGHSFGVPSA 110
            +  VT  L+DVQ++    V ADT LVGH ++ DL+AL++VH R+IDT  +YPHPRG  F+  L+     FL RKIQ +R  GHDS+EDA A+++L  LK+H G SFG PS+
Sbjct:  278 LNDVTTTLADVQKDFLKLVSADTFLVGHSLDSDLKALQIVHHRVIDTAFIYPHPRGPPFRPALRILSEMFLKRKIQDRRKLGHDSIEDARAAMDLTKLKIHNGPSFGEPSS 388          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A2P2LGV8_RHIMU (Uncharacterized protein MANES_18G085900 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGV8_RHIMU)

HSP 1 Score: 114 bits (284), Expect = 3.720e-27
Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMHRGHSFGVPSAWAAKLNP 117
            ++GVT  L DVQ      V  +T LVGH +E DL ALK+ H  +IDT  LY HPRGG++K  L+     FL R+IQ    GHDS+EDA A++ELALLK+  G  FG P ++  +  P
Sbjct:   30 LEGVTTSLKDVQENFLKLVCKETILVGHSLENDLLALKISHESVIDTALLYKHPRGGSYKTALRVLAKRFLSREIQQSDVGHDSIEDAKAAMELALLKIRNGPDFGSPPSFLRRKLP 146          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A7S2CGL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGL3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 7.820e-27
Identity = 62/141 (43.97%), Postives = 86/141 (60.99%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREI--RTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQ--RSGHDSVEDAYASLELALLKMHRG-------HSFGVPSAWAAKLNP-PRESLFDVLERR 129
            ++GVT +L DVQR++  R  V +D  LVGH +E DLRALKLVH  +IDT  LY HPRG  FK+ LK+    +LG+ IQ     +GHDS +DA A+++LA+L++  G          G+P  WA   +   ++ LFD L  R
Sbjct:   52 MEGVTLRLCDVQRDLFSRGLVRSDVILVGHSIESDLRALKLVHPTVIDTAVLYQHPRGPPFKLSLKDLAKRYLGQTIQSGDGTTGHDSEQDAKAAMDLAILRIRHGLRARSSSSHLGLPKVWADSTSGLTKQHLFDSLAHR 192          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: A0A7S3XWP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK)

HSP 1 Score: 108 bits (270), Expect = 8.530e-27
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMH 100
            +QG T  L + Q ++  F+G +T + GH ++ DLRALKL+H R+IDT  LYP PRG  FK  LK     +LGR+IQ    GHDS +DA A+L+L LLK H
Sbjct:   47 MQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTKRYLGRQIQESEDGHDSAQDAVATLQLVLLKAH 146          
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Match: UPI00192201D4 (small RNA degrading nuclease 5-like isoform X3 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI00192201D4)

HSP 1 Score: 114 bits (285), Expect = 1.050e-26
Identity = 53/111 (47.75%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    1 IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQLYPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMHRGHSFGVPSAW 111
            + GVT  L DVQ +    V  DT LVGH +E DL ALK+ H  ++DT  LY HPRGG++K  L+     FL R+IQ   +GHDS+EDA A+++LA+LK+  G  FG P ++
Sbjct:  261 LSGVTTSLQDVQEDFLKLVHKDTILVGHSLENDLLALKISHDLIVDTSVLYKHPRGGSYKSALRVLAKRFLSREIQQSETGHDSIEDARAAMDLAMLKIRNGPDFGTPPSF 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16337.3628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ11_ECTSI2.850e-6360.87Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A836CFL3_9STRA2.260e-4244.81Exonuclease domain-containing protein n=1 Tax=Trib... [more]
A0A0L0G7E4_9EUKA6.450e-2854.21Exonuclease domain-containing protein n=1 Tax=Spha... [more]
A0A1U8AV44_NELNU2.070e-2750.88small RNA degrading nuclease 5 isoform X1 n=3 Tax=... [more]
A0A7J7BTH4_TRIWF2.830e-2748.25Small RNA degrading nuclease 5 isoform X2 n=1 Tax=... [more]
A0A388LS10_CHABU3.660e-2751.35Exonuclease domain-containing protein n=1 Tax=Char... [more]
A0A2P2LGV8_RHIMU3.720e-2747.86Uncharacterized protein MANES_18G085900 n=1 Tax=Rh... [more]
A0A7S2CGL3_9STRA7.820e-2743.97Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3XWP5_HETAK8.530e-2750.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI00192201D41.050e-2647.75small RNA degrading nuclease 5-like isoform X3 n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..105
e-value: 5.2E-23
score: 83.4
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 2..104
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16337contigH-paniculata_contig16337:2246..5769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16337.3628.1mRNA_H-paniculata_contig16337.3628.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16337 2246..5769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16337.3628.1 ID=prot_H-paniculata_contig16337.3628.1|Name=mRNA_H-paniculata_contig16337.3628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
IQGVTRKLSDVQREIRTFVGADTCLVGHGVEGDLRALKLVHRRLIDTGQL
YPHPRGGAFKIGLKEACGTFLGRKIQGQRSGHDSVEDAYASLELALLKMH
RGHSFGVPSAWAAKLNPPRESLFDVLERRALPLPIRCSIFGDLDGRVMAE
SDGGGGGDGGTPLWSAHKLGYRRELDAVWTGRRF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf