prot_H-paniculata_contig1630.3614.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1630.3614.1
Unique Nameprot_H-paniculata_contig1630.3614.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length307
Homology
BLAST of mRNA_H-paniculata_contig1630.3614.1 vs. uniprot
Match: D8LJ07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ07_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.120e-91
Identity = 190/321 (59.19%), Postives = 222/321 (69.16%), Query Frame = 0
Query:    1 MSSRNRLRVATGITNIGGTAXXXXXXXXKRPGTASIQLTARLS-RRDDMLHGSASTPALAQTSTSEE------IRGSARPLPPLDDWGSGSA-RPSTTPGAFGRHASLNVTGAEVGARRDGRDDWTKKFVP-------EASSV-DNGLSSIPLGLHKMGRDDLEVYVDIVRNSLARKVGKSQAASRANSRVPIVEQVNSIPQVGTQSEFRALIQAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXAEKVVGRRIMAEMFLENHTEDLHLYGQGLAQNSVADNVENISRSRGFKKIINGLREKEKKFTNHGSADV 305
            MS R  LRV+ G+TN    +        +  G AS QLTARLS R    L GSASTPAL +++ + +      + G   PLPPL  WG  +  RP TT GA+GR +S N    E+GA  +GR      F P       EA+ + D+  + IPLGL K+ R+DLEVYV+IVR +LAR+  K QAAS +      V QVN+IPQV TQS+FRALI+AQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXAEKVVGRRIM E+FL+NH  DLHLYGQGLAQ S+A NVE+ISRSRGFKKII GLREKEK F NHGS  V
Sbjct:    1 MSGRRTLRVSQGVTNAAAASRSQ-----RSHGIASAQLTARLSGRMGGALLGSASTPALGRSAHNHQSIHVPNLEGGDNPLPPLGGWGGATPPRPRTTAGAYGRPSSSNP---EIGAGENGR-----LFTPPNGGGGGEANGLLDDRGADIPLGLSKLDREDLEVYVNIVRANLARQAKKEQAASASLVDDETV-QVNNIPQVATQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXAEKVVGRRIMTEVFLDNHKHDLHLYGQGLAQKSIAANVEDISRSRGFKKIIGGLREKEKNFVNHGSDGV 307          
BLAST of mRNA_H-paniculata_contig1630.3614.1 vs. uniprot
Match: A0A7S1U1N7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1N7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.350e-22
Identity = 56/127 (44.09%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  180 QVNSIPQVGTQSEFRALIQAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXAEKVVGRRIMAEMFLENHTEDLHLYGQGLAQNSVADNVENISRSRGFKKIINGLREKEKKFTNHGSADVR 306
            +VN++ Q G+  E     +  NIPH SYDIDGDG VSQED  LAKRF           E+ VG+RI+AE F   H ED+HLYG      SV +NV+ ++R+  F K +  L   EK F   GS  V+
Sbjct:  153 EVNNLIQSGSYHELAERRKMLNIPHASYDIDGDGFVSQEDLFLAKRFDLDGNGVLDPDEREVGKRILAEEFFNRHAEDIHLYGDEYEGKSVKENVKALARNVNFFKTMTNLHNMEKTFNERGSMQVK 279          
BLAST of mRNA_H-paniculata_contig1630.3614.1 vs. uniprot
Match: F0XYW8_AURAN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYW8_AURAN)

HSP 1 Score: 88.6 bits (218), Expect = 3.560e-16
Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 0
Query:  182 NSIPQVGTQSEFRALIQAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXAEKVVGRRIMAEMFLENHTEDLHLYG-QGLAQNSVA---DNVENISRSRGFKKIINGLREKEKKFTNHGSADV 305
            N++P+  T+SEF+  ++  N+PH SYD+DGDG VS +DY ++K             ++  GR+ +A  F  NH  D HLYG Q  A+   A   +N E ++ +  F   +  L  KEK+  NHGS D+
Sbjct:  189 NNMPRSRTRSEFKKKLRGVNVPHWSYDLDGDGEVSHDDYKISKALDALGTGQLSPVQRTRGRKTLASQFFRNHQRDAHLYGSQWTARPGSAAAEENAERLATNPSFNYSLCKLNMKEKRLINHGSYDM 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1630.3614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJ07_ECTSI1.120e-9159.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U1N7_9STRA9.350e-2244.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0XYW8_AURAN3.560e-1636.72Cytochrome b5 heme-binding domain-containing prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 208..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1630contigH-paniculata_contig1630:17836..23653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1630.3614.1mRNA_H-paniculata_contig1630.3614.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1630 17836..23653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1630.3614.1 ID=prot_H-paniculata_contig1630.3614.1|Name=mRNA_H-paniculata_contig1630.3614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
MSSRNRLRVATGITNIGGTAAAAQQQQQKRPGTASIQLTARLSRRDDMLH
GSASTPALAQTSTSEEIRGSARPLPPLDDWGSGSARPSTTPGAFGRHASL
NVTGAEVGARRDGRDDWTKKFVPEASSVDNGLSSIPLGLHKMGRDDLEVY
VDIVRNSLARKVGKSQAASRANSRVPIVEQVNSIPQVGTQSEFRALIQAQ
NIPHPSYDIDGDGVVSQEDYALAKRFDINGDGVLDEAEKVVGRRIMAEMF
LENHTEDLHLYGQGLAQNSVADNVENISRSRGFKKIINGLREKEKKFTNH
GSADVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS