prot_H-paniculata_contig16256.3597.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16256.3597.1
Unique Nameprot_H-paniculata_contig16256.3597.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
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BLAST of mRNA_H-paniculata_contig16256.3597.1 vs. uniprot
Match: A0A6H5JHV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV2_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 2.520e-67
Identity = 136/228 (59.65%), Postives = 167/228 (73.25%), Query Frame = 0 
Query:    1 RELRRRRQEAYRRDLNMQIVEDAGRREWEVKRLQQLDQQHELKS-ATYNPWGKPGSGAPLRHLNGELVTNVKAYHRAKQQGLIAHDLSPNEIRDDEKPFGFTLTDTE-----DGRKQWSLPPRTSRSSG-ARVGFTSLSTNQTRDSES-SLSPPRSRYRFDRLPPEEQYDLDRRRKGRQELQVALLEQVEEKRARIAREAAAKQAEDEVDRINVLKALAYERAVSRGR 220
            RE RR RQEAYRR+L+ QI +   RRE   ++L++L+++HEL+S ATYNPWGKPGSGAPLR  +G LVTNVKAY+RAKQ+GLIA DLSPNEI D+E+PFG+TLT        +G  +   P RTSRS+  A  G       ++ D+ + SLSPPR+RYRFDRLPPEEQ  LDRR K RQEL+ ALL QVEEKRA+   E AAKQAED+ +R  VL+ LA ERA +R R
Sbjct:   25 REQRRARQEAYRRELSSQIADTEARRELHARKLRELEERHELQSVATYNPWGKPGSGAPLRQADGALVTNVKAYYRAKQRGLIAQDLSPNEIGDNEQPFGYTLTTKSKMQRFNGIPEDRSPLRTSRSAACAATGKVGEQGPRSIDAVTVSLSPPRNRYRFDRLPPEEQSYLDRRMKERQELEAALLSQVEEKRAKRELERAAKQAEDKEERARVLRVLAEERAANRHR 252
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BLAST of mRNA_H-paniculata_contig16256.3597.1 vs. uniprot
Match: D8LGW5_ECTSI (Similar to centrosome spindle pole associated protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW5_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 2.600e-56
Identity = 126/225 (56.00%), Postives = 146/225 (64.89%), Query Frame = 0 
Query:    1 RELRRRRQEAYRRDLNMQIVEDAGRREWEVKRLQQLDQQHELKSATYNPWGKPGSGAPLRHLNGELVTNVKAYHRAKQQGLIAHDLSPNEIRDDEKPFGFTLTDTEDGRKQWSLPPRTSRSSGA----RVGFTSLSTNQTRDSES-SLSPPRSRYRFDRLPPEEQYDLDRRRKGRQELQVALLEQVEEKRARIAREAAAKQAEDEVDRINVLKALAYERAVSRGR 220
            RE RR RQEAYRR+L+ QI +   RRE   +        HEL+SATYNPWGKPGSGAPLR  +G LVTNVKAYHRAKQ+GLIA DLSPNEI D+E+PFG+TLT       +   P RTSRS+      RVG   L   ++ D+ + SLSPPR+RYRFDRLPPEEQ  LDRR K RQEL+ ALL QVEEKR                    VL+ LA ERA +R R
Sbjct:   25 REQRRARQEAYRRELSSQIADMEARRELHARXXXXXXXXHELQSATYNPWGKPGSGAPLRQADGALVTNVKAYHRAKQRGLIAQDLSPNEIGDNEQPFGYTLTTKSIPEDR--SPLRTSRSAACAATGRVGEQGL---RSIDAVTVSLSPPRNRYRFDRLPPEEQSYLDRRIKERQELEAALLSQVEEKRXXXXXXXXXXXXXXXXXXXRVLRVLAEERAANRHR 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16256.3597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHV2_9PHAE2.520e-6759.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGW5_ECTSI2.600e-5656.00Similar to centrosome spindle pole associated prot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..225
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
IPR026708Centrosome and spindle pole associated protein 1PANTHERPTHR21616CENTROSOME SPINDLE POLE ASSOCIATED PROTEINcoord: 5..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16256contigH-paniculata_contig16256:196..3353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16256.3597.1mRNA_H-paniculata_contig16256.3597.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16256 196..3353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16256.3597.1 ID=prot_H-paniculata_contig16256.3597.1|Name=mRNA_H-paniculata_contig16256.3597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
RELRRRRQEAYRRDLNMQIVEDAGRREWEVKRLQQLDQQHELKSATYNPW
GKPGSGAPLRHLNGELVTNVKAYHRAKQQGLIAHDLSPNEIRDDEKPFGF
TLTDTEDGRKQWSLPPRTSRSSGARVGFTSLSTNQTRDSESSLSPPRSRY
RFDRLPPEEQYDLDRRRKGRQELQVALLEQVEEKRARIAREAAAKQAEDE
VDRINVLKALAYERAVSRGRYDQVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026708CSPP1