prot_H-paniculata_contig16219.3580.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16219.3580.1
Unique Nameprot_H-paniculata_contig16219.3580.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length160
Homology
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BLAST of mRNA_H-paniculata_contig16219.3580.1 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.430e-25
Identity = 60/127 (47.24%), Postives = 78/127 (61.42%), Query Frame = 0 
Query:   35 YPKHEASASGAYSLLAYGAVSADHPEHPDAFLPELMAIQAMREAHARD----SGQPVAVTKQEERFRERHPPQVPPAKHKAFGAWTSGYERMLEDVYRDRCSLSPQFTTKTNSFSGVIDHIFVSSGE 157
            YP  +A+ASG Y LL YG V   HPEHPD F+PE +  +   E   ++     G  +   ++  R R      V PA+H+  G W SG+   LED YRDR ++SP FTTKT+SFSG+IDHIFVS+GE
Sbjct:  421 YPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELPKVGGGKLWTPRRTRRTRGAP---VVPAEHRPSGEWVSGFGGTLEDAYRDRGAVSPSFTTKTSSFSGIIDHIFVSTGE 544
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16219.3580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIG3_ECTSI1.430e-2547.24Endo/exonuclease/phosphatase domain-containing pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16219contigH-paniculata_contig16219:3819..5317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16219.3580.1mRNA_H-paniculata_contig16219.3580.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16219 3819..5317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16219.3580.1 ID=prot_H-paniculata_contig16219.3580.1|Name=mRNA_H-paniculata_contig16219.3580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
MQARAQDALHRDNVPPPFTATTDSGIPILHCPVYYPKHEASASGAYSLLA
YGAVSADHPEHPDAFLPELMAIQAMREAHARDSGQPVAVTKQEERFRERH
PPQVPPAKHKAFGAWTSGYERMLEDVYRDRCSLSPQFTTKTNSFSGVIDH
IFVSSGEPGG
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